RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CDO1Q16878 200 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 INTS6LQ5JSJ4 861 aaKnown RBP15.58■□□□□ 0.08
CCDC47-201ENST00000225726 DRICH1Q6PGQ1 229 aaPredicted RBP15.58■□□□□ 0.08
CCDC47-201ENST00000225726 COLGALT2Q8IYK4 626 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 TSEN2Q8NCE0 465 aaKnown RBP15.58■□□□□ 0.08
CCDC47-201ENST00000225726 DBF4BQ8NFT6 615 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 TEKT4Q8WW24 435 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 HSPH1Q92598 858 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 FAM129AQ9BZQ8 928 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 LRRC4Q9HBW1 653 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 TBC1D13Q9NVG8 400 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 SNX24Q9Y343 169 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 PQBP1O60828 265 aaKnown RBP15.58■□□□□ 0.08
CCDC47-201ENST00000225726 GAS8O95995 478 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 MAP3K7CLP57077 242 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 ATP11AP98196 1134 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 FAM171BQ6P995 826 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 ZNF280BQ86YH2 543 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 THEM5Q8N1Q8 247 aa15.58■□□□□ 0.08
CCDC47-201ENST00000225726 C11orf84Q9BUA3 381 aaPredicted RBP15.58■□□□□ 0.08
CCDC47-201ENST00000225726 DDX23Q9BUQ8 820 aaKnown RBP15.58■□□□□ 0.08
CCDC47-201ENST00000225726 HSF2BPO75031 334 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 RPL21P46778 160 aaKnown RBP15.57■□□□□ 0.08
CCDC47-201ENST00000225726 LMNB2Q03252 620 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 OVOS1Q6IE37 1185 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 CENPIQ92674 756 aaPredicted RBP15.57■□□□□ 0.08
CCDC47-201ENST00000225726 SMARCD1Q96GM5 515 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 TBCBQ99426 244 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 SMOQ99835 787 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 FRMD8P1Q9BZ68 369 aaPredicted RBP15.57■□□□□ 0.08
CCDC47-201ENST00000225726 NGRNQ9NPE2 291 aaKnown RBP15.57■□□□□ 0.08
CCDC47-201ENST00000225726 ZDHHC18Q9NUE0 388 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.57■□□□□ 0.081e-18■□□□□ 8.7
CCDC47-201ENST00000225726 GRHL1Q9NZI5 618 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 LIASO43766 372 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 B4GALT3O60512 393 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 DAB1O75553 588 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 FBXO21O94952 628 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 ITGB1P05556 798 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 MRPS5P82675 430 aaKnown RBP15.57■□□□□ 0.08
CCDC47-201ENST00000225726 ADCY1Q08828 1119 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 KCTD19Q17RG1 926 aaPredicted RBP15.57■□□□□ 0.08
CCDC47-201ENST00000225726 RAB6CQ53S08 254 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 BOLA3Q53S33 107 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 ALS2CLQ60I27 953 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 ANKRD33Q7Z3H0 272 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 SIX6OS1Q8N1H7 587 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 MYLPFQ96A32 169 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 LRRC45Q96CN5 670 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 CCDC114Q96M63 670 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 PKMYT1Q99640 499 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 RAB6CQ9H0N0 254 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 PCDHB7Q9Y5E2 793 aa15.57■□□□□ 0.08
CCDC47-201ENST00000225726 RNASELQ05823 741 aaKnown RBP15.56■□□□□ 0.08
CCDC47-201ENST00000225726 SLC39A5Q6ZMH5 540 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 BBS12Q6ZW61 710 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 FAM193BQ96PV7 902 aaPredicted RBP15.56■□□□□ 0.08
CCDC47-201ENST00000225726 WBP1LQ9NX94 342 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 ENDOD1O94919 500 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 ARSEP51690 589 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 FMO2Q99518 471 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 GOLGA6BA6NDN3 693 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 PARNO95453 639 aaKnown RBP15.56■□□□□ 0.08
CCDC47-201ENST00000225726 PDK2Q15119 407 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 MAPRE1Q15691 268 aaKnown RBP15.56■□□□□ 0.08
CCDC47-201ENST00000225726 ZDHHC24Q6UX98 284 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 TTC13Q8NBP0 860 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 CRISPLD2Q9H0B8 497 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 MED4Q9NPJ6 270 aa15.56■□□□□ 0.08
CCDC47-201ENST00000225726 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCDC47-201ENST00000225726 F8W810 466 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 H3BQF6 201 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 CD48P09326 243 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 OAS2P29728 719 aaKnown RBP15.55■□□□□ 0.08
CCDC47-201ENST00000225726 MATKP42679 507 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 TKTL1P51854 596 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 HDAC4P56524 1084 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 RAB41Q5JT25 222 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 SCYL2Q6P3W7 929 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 FAM118BQ9BPY3 351 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 CSNK1G1Q9HCP0 422 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 WHRNQ9P202 907 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 DRG1Q9Y295 367 aaKnown RBP15.55■□□□□ 0.08
CCDC47-201ENST00000225726 NEU2Q9Y3R4 380 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 MDM4O15151 490 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 OR1G1P47890 313 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 CDH6P55285 790 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 TSPY1Q01534 308 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 BYSLQ13895 437 aaKnown RBP15.55■□□□□ 0.08
CCDC47-201ENST00000225726 VSIG1Q86XK7 387 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 RFX6Q8HWS3 928 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 ABI1Q8IZP0 508 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 ZMIZ2Q8NF64 920 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 HIPK3Q9H422 1215 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 DCDC2CA8MYV0 355 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 HSP90B2PQ58FF3 399 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 STRADAQ7RTN6 431 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 MAP7D3Q8IWC1 876 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 OR10T2Q8NGX3 314 aa15.55■□□□□ 0.08
CCDC47-201ENST00000225726 ART4Q93070 314 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms