RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 MAP3K7O43318 606 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 FAM189A1O60320 539 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 LSM8O95777 96 aaKnown RBP12.93□□□□□ -0.34
NUP88-201ENST00000225696 ANPEPP15144 967 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 MIPP30301 263 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 RAP1GDS1P52306 607 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 ALDH18A1P54886 795 aaKnown RBP12.93□□□□□ -0.34
NUP88-201ENST00000225696 ARHGAP8P85298 464 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 ROR2Q01974 943 aaKnown RBP12.93□□□□□ -0.34
NUP88-201ENST00000225696 IZUMO2Q6UXV1 221 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 KCTD6Q8NC69 237 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 DEPTORQ8TB45 409 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 TUBGCP5Q96RT8 1024 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 MMP19Q99542 508 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 TUBB6Q9BUF5 446 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 PORCNQ9H237 461 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 VCXQ9H320 206 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 RNF146Q9NTX7 359 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 IKBKGQ9Y6K9 419 aa12.93□□□□□ -0.34
NUP88-201ENST00000225696 HMX2A2RU54 273 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 PIK3R2O00459 728 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 COPEO14579 308 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 RFPL1O75677 317 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 ERBB2P04626 1255 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 CCND2P30279 289 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 AQP5P55064 265 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 CDH8P55286 799 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 PSMC1P62191 440 aaKnown RBP12.92□□□□□ -0.34
NUP88-201ENST00000225696 KCNJ11Q14654 390 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 CHI3L2Q15782 390 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 ULK2Q8IYT8 1036 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 RDM1Q8NG50 284 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 RPAP3Q9H6T3 665 aaPredicted RBP12.92□□□□□ -0.34
NUP88-201ENST00000225696 ZNF212Q9UDV6 495 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 PLLPQ9Y342 182 aa12.92□□□□□ -0.34
NUP88-201ENST00000225696 APOC4-APOC2K7ER74 178 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 VWA5AO00534 786 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 BAG2O95816 211 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 PIGRP01833 764 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 APOC2P02655 101 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 LYNP07948 512 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 CD19P15391 556 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 EIF4BP23588 611 aaKnown RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 CDH5P33151 784 aaPredicted RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 ASPAP45381 313 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 TMPRSS15P98073 1019 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 TEX44Q53QW1 395 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 RNF111Q6ZNA4 994 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 TMPRSS6Q8IU80 811 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 SCUBE1Q8IWY4 988 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 GPRASP2Q96D09 838 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 ASCC2Q9H1I8 757 aaPredicted RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 PCMTD2Q9NV79 361 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 NXF1Q9UBU9 619 aaKnown RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 COL4A5P29400 1685 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 ANKRD33BA6NCL7 494 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 ARL2P36404 184 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 YWHAZP63104 245 aaKnown RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 IRX4P78413 519 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 LRRC36Q1X8D7 754 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 XKR3Q5GH77 459 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 TRMT10BQ6PF06 316 aaKnown RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 DARS2Q6PI48 645 aaKnown RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 C1orf228Q6PIY5 440 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 ATG14Q6ZNE5 492 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 RAPH1Q70E73 1250 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 CDR2LQ86X02 465 aaPredicted RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 TTLL6Q8N841 843 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 PPFIBP2Q8ND30 876 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 GSTCDQ8NEC7 633 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 CCDC110Q8TBZ0 833 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 ZNF668Q96K58 619 aaPredicted RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 FGD4Q96M96 766 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 CCDC106Q9BWC9 280 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 DHX33Q9H6R0 707 aaKnown RBP12.91□□□□□ -0.34
NUP88-201ENST00000225696 RAB6BQ9NRW1 208 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 HMGXB4Q9UGU5 601 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 EFR3BQ9Y2G0 817 aa12.91□□□□□ -0.34
NUP88-201ENST00000225696 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 KLF11O14901 512 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 MAGEC1O60732 1142 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 RNASEH1O60930 286 aaKnown RBP12.9□□□□□ -0.34
NUP88-201ENST00000225696 TM7SF2O76062 418 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 KRT7P08729 469 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 CSH1P0DML2 217 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 CSH2P0DML3 217 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 CALRP27797 417 aaKnown RBP12.9□□□□□ -0.34
NUP88-201ENST00000225696 ACTR3P61158 418 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 OSTNP61366 133 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 TFAMQ00059 246 aaKnown RBP12.9□□□□□ -0.34
NUP88-201ENST00000225696 CAPSQ13938 189 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 RBBP5Q15291 538 aaKnown RBP12.9□□□□□ -0.34
NUP88-201ENST00000225696 FAM91A1Q658Y4 838 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 TRNP1Q6NT89 227 aa12.9□□□□□ -0.34
NUP88-201ENST00000225696 CYP4V2Q6ZWL3 525 aaPredicted RBP12.9□□□□□ -0.34
NUP88-201ENST00000225696 CAND1Q86VP6 1230 aaKnown RBP12.9□□□□□ -0.34
NUP88-201ENST00000225696 SLC26A11Q86WA9 606 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms