RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 PCDH8O95206 1070 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 PBX3P40426 434 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 RPA4Q13156 261 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 SLC13A2Q13183 592 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 FAXCQ5TGI0 409 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 MFSD5Q6N075 450 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 PRPF39Q86UA1 669 aaKnown RBP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 FATE1Q969F0 183 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 NEIL1Q96FI4 390 aaPredicted RBP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 SPATA13Q96N96 652 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 CDIP1Q9H305 208 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 SMNDC1O75940 238 aaKnown RBP eCLIP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 LMNAP02545 664 aaKnown RBP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 MSL3P1P0C860 447 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 UBL4AP11441 157 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 TM4SF1P30408 202 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 GPC3P51654 580 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 CYP4F22Q6NT55 531 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 TMEM154Q6P9G4 183 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 FAM83AQ86UY5 434 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 ITPRIPQ8IWB1 547 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 FBXO30Q8TB52 745 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 TNPO1Q92973 898 aaKnown RBP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 WDFY2Q96P53 400 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 RBM14Q96PK6 669 aaKnown RBP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 TRAPPC9Q96Q05 1148 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 UHRF1Q96T88 793 aaPredicted RBP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 CITED2Q99967 270 aaPredicted RBP9.11□□□□□ -0.95
VSIG1-201ENST00000217957 REEP2Q9BRK0 252 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 ZPBPQ9BS86 351 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 EDEM2Q9BV94 578 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 ADGRL3Q9HAR2 1447 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 ZNF304Q9HCX3 659 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 KLHL20Q9Y2M5 609 aa9.11□□□□□ -0.95
VSIG1-201ENST00000217957 NPIPB15A6NHN6 443 aaPredicted RBP9.1□□□□□ -0.95
VSIG1-201ENST00000217957 CASQ2O14958 399 aaPredicted RBP9.1□□□□□ -0.95
VSIG1-201ENST00000217957 CLEC3BP05452 202 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 NR2F1P10589 423 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 PCNAP12004 261 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 SLC5A3P53794 718 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 RARSP54136 660 aaKnown RBP9.1□□□□□ -0.95
VSIG1-201ENST00000217957 SATB1Q01826 763 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 KRT17Q04695 432 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 EIF2B5Q13144 721 aaKnown RBP9.1□□□□□ -0.95
VSIG1-201ENST00000217957 CUL2Q13617 745 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 SGO2Q562F6 1265 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 FAM35AQ86V20 835 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 SH3RF2Q8TEC5 729 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 KCNE4Q8WWG9 221 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 TBX20Q9UMR3 447 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 DTNAQ9Y4J8 743 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 TECPR2O15040 1411 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 BTBD18B2RXH4 712 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 H7BY64 318 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 J3QL48 77 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 PRAMEF12O95522 483 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 HLA-DPA1P20036 260 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 PAFAH1B1P43034 410 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 AP2B1P63010 937 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 NOMO1Q15155 1222 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 NFIL3Q16649 462 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 HSP90B2PQ58FF3 399 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 KLHL24Q6TFL4 600 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 GBP6Q6ZN66 633 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.1□□□□□ -0.95
VSIG1-201ENST00000217957 PGAP3Q96FM1 320 aaPredicted RBP9.1□□□□□ -0.95
VSIG1-201ENST00000217957 LENG8Q96PV6 779 aaPredicted RBP9.1□□□□□ -0.95
VSIG1-201ENST00000217957 UIMC1Q96RL1 719 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 TRIM7Q9C029 511 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 FAM153AQ9UHL3 310 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 TMPRSS11EQ9UL52 423 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 NSD2O96028 1365 aa9.1□□□□□ -0.95
VSIG1-201ENST00000217957 PXDNQ92626 1479 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 GPR75-ASB3A0A0A6YYF3 556 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 A0A1B0GTH6 734 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 POTEB2H3BUK9 544 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 SYN3O14994 580 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 PRR35P0CG20 571 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 EIF2S2P20042 333 aaKnown RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 DNAJB1P25685 340 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 HOXA11P31270 313 aaPredicted RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 PSMC4P43686 418 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 NKX6-1P78426 367 aaPredicted RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 DEUP1Q05D60 604 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 SLC39A12Q504Y0 691 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 ATPAF1Q5TC12 328 aaPredicted RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 MEX3CQ5U5Q3 659 aaKnown RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 FBXO15Q8NCQ5 510 aaPredicted RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 FEM1CQ96JP0 617 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 PTCHD1Q96NR3 888 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 TTPALQ9BTX7 342 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 FUT8Q9BYC5 575 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 SMG9Q9H0W8 520 aaKnown RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 USP18Q9UMW8 372 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 ASB3Q9Y575 518 aa9.09□□□□□ -0.95
VSIG1-201ENST00000217957 RBBP6Q7Z6E9 1792 aaKnown RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
VSIG1-201ENST00000217957 MAN2B1O00754 1011 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms