RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MEI4A8MW99 385 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 F5H423 210 aaPredicted RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 SMAPO00193 183 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 MCF2LO15068 1137 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 KRT7P08729 469 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 KCNA3P22001 575 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 CACNA2D1P54289 1103 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 ENPEPQ07075 957 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 ZNF699Q32M78 642 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 IRGCQ6NXR0 463 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 SLC30A9Q6PML9 568 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 PRPF31Q8WWY3 499 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 TWNKQ96RR1 684 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 MAP3K20Q9NYL2 800 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 FETUBQ9UGM5 382 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 HNRNPCL1O60812 293 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 DKC1O60832 514 aaKnown RBP eCLIP14.62□□□□□ -0.07
USH1C-201ENST00000005226 SKIP12755 728 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 EIF4BP23588 611 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 ASPAP45381 313 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 AQP5P55064 265 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 CDH6P55285 790 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 MRPS5P82675 430 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 UBAP2LQ14157 1087 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 LBRQ14739 615 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 C15orf59Q2T9L4 293 aaPredicted RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 ZC3H12AQ5D1E8 599 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 FAM83AQ86UY5 434 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 BRSK2Q8IWQ3 736 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 UBA3Q8TBC4 463 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 EBF4Q9BQW3 602 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 PLAC1Q9HBJ0 212 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 STX18Q9P2W9 335 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 RPL26L1Q9UNX3 145 aaKnown RBP14.62□□□□□ -0.07
USH1C-201ENST00000005226 HEY1Q9Y5J3 304 aa14.62□□□□□ -0.07
USH1C-201ENST00000005226 COL4A5P29400 1685 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 LGR5O75473 907 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 NPTXRO95502 500 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 GJB1P08034 283 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 PAPOLAP51003 745 aaKnown RBP14.61□□□□□ -0.07
USH1C-201ENST00000005226 OCRLQ01968 901 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 ROR1Q01973 937 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 CNTN2Q02246 1040 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 AP1B1Q10567 949 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 BIRC2Q13490 618 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 DUOXA2Q1HG44 320 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 POLNQ7Z5Q5 900 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 CHSY1Q86X52 802 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 XYLT1Q86Y38 959 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 TMEM192Q8IY95 271 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 TTC13Q8NBP0 860 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.61□□□□□ -0.07
USH1C-201ENST00000005226 USP18Q9UMW8 372 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 TTLL3Q9Y4R7 772 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 ASB3Q9Y575 518 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 SPATA31C2B4DYI2 1134 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 APOC4-APOC2K7ER74 178 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 MAP3K7O43318 606 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 PIGRP01833 764 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 APOC2P02655 101 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 FESP07332 822 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 SARNPP82979 210 aaKnown RBP14.61□□□□□ -0.07
USH1C-201ENST00000005226 KRT72Q14CN4 511 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 TMEM132BQ14DG7 1078 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 LRRC36Q1X8D7 754 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 SGSM1Q2NKQ1 1148 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 CMPK2Q5EBM0 449 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 MROH9Q5TGP6 573 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 RIPOR1Q6ZS17 1223 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 LRRC71Q8N4P6 559 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 CFAP61Q8NHU2 1237 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 PIWIL1Q96J94 861 aaKnown RBP14.61□□□□□ -0.07
USH1C-201ENST00000005226 RILPQ96NA2 401 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 PANX3Q96QZ0 392 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 TUBB6Q9BUF5 446 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 SHCBP1LQ9BZQ2 653 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 SDCBP2Q9H190 292 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 SCOCQ9UIL1 159 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 NR2E3Q9Y5X4 410 aa14.61□□□□□ -0.07
USH1C-201ENST00000005226 PRR5-ARHGAP8B1AHC4 643 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 KCNN4O15554 427 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 FAM189A1O60320 539 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 TGDSO95455 350 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 TRUB2O95900 331 aaKnown RBP14.6□□□□□ -0.07
USH1C-201ENST00000005226 YWHAZP63104 245 aaKnown RBP14.6□□□□□ -0.07
USH1C-201ENST00000005226 ARHGAP8P85298 464 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 TAP1Q03518 808 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 TRMT10BQ6PF06 316 aaKnown RBP14.6□□□□□ -0.07
USH1C-201ENST00000005226 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.6□□□□□ -0.07
USH1C-201ENST00000005226 PPFIBP2Q8ND30 876 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 SMC1BQ8NDV3 1235 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 CCDC110Q8TBZ0 833 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 E2F7Q96AV8 911 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 PHACTR1Q9C0D0 580 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 PCMTD2Q9NV79 361 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 SLC17A6Q9P2U8 582 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 ZC3H7BQ9UGR2 993 aaKnown RBP14.6□□□□□ -0.07
USH1C-201ENST00000005226 ARID2Q68CP9 1835 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 ADCY3O60266 1144 aa14.6□□□□□ -0.07
USH1C-201ENST00000005226 SORBS2O94875 1100 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms