RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Traf3ip2Q8N7N6 555 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Cyp4a12aQ91WL5 508 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 AticQ9CWJ9 592 aaKnown RBP20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Slc39a5Q9D856 535 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Dpysl5Q9EQF6 564 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Fzd2Q9JIP6 570 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Rpf2Q9JJ80 306 aaKnown RBP20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Fibcd1A2AV25 459 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 4930444G20RikD3Z741 495 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Vmn2r115E9Q0E7 857 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Olfr731F8VQB9 326 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Gm7694J3QNH8 270 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Nr2c2P49117 596 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Sesn2P58043 480 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Hrh2P97292 397 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Krt86P97861 486 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Ccdc42Q5SV66 316 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Sema4bQ62179 823 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Pwwp2aQ69Z61 730 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Panx2Q6IMP4 677 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Mon1aQ6PDG8 556 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Zfp512bQ6PHP4 879 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Tlr11Q6R5P0 926 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Fam102aQ78T81 392 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Gpr62Q80UC6 358 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Ctxn3Q8BXZ0 80 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Taf12Q8VE65 161 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Lims2Q91XD2 341 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Cldnd1Q9CQX5 253 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Rfc5Q9D0F6 339 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Lrrc57Q9D1G5 239 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Ppp2r3cQ9JK24 453 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Ptgdr2Q9Z2J6 382 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Vwa8Q8CC88 1905 aa20.9■□□□□ 0.94
Lig3-204ENSMUST00000131537 Olfr1305A2AVW3 312 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Tmem215A7E1Z1 235 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Vmn2r100E9QAZ9 850 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Mybl1P51960 751 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 YwhaqP68254 245 aaKnown RBP20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Zscan2Q07230 614 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Nhej1Q3KNJ2 295 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 DhpsQ3TXU5 369 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Cyp2j11Q3UNV2 504 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Tfap2bQ61313 459 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Ppa2Q91VM9 330 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Ddx27Q921N6 760 aaKnown RBP20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Fam212aQ9CX62 282 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Kif12Q9D2Z8 642 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Pus10Q9D3U0 527 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Rin2Q9D684 903 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Rdh14Q9ERI6 334 aa20.89■□□□□ 0.93
Lig3-204ENSMUST00000131537 Entpd2O55026 495 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Rpl7aP12970 266 aaKnown RBP20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Gjc1P28229 396 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Ccdc125Q5U465 500 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 PtprcapQ64697 197 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Vtcn1Q7TSP5 283 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Plekhs1Q8BW88 474 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Taf10Q8K0H5 218 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Il17cQ8K4C5 194 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Atg13Q91YI1 516 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Fbxo32Q9CPU7 355 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Trmt11Q9CWH5 460 aa20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Mrpl4Q9DCU6 294 aaKnown RBP20.88■□□□□ 0.93
Lig3-204ENSMUST00000131537 Maml3D4QGC2 1135 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 DgkdE9PUQ8 1220 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Dbx1P52950 335 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Dzip1lQ499E4 774 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Krba1Q6NXZ1 1043 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Dpp3Q99KK7 738 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Irx5Q9JKQ4 484 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 TfgQ9Z1A1 397 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 A930018M24RikB7ZMY3 218 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Gm8994E9PV04 411 aaKnown RBP20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Ube3aO08759 870 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 mt-Co3P00416 261 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Slc2a4P14142 509 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 HpdP49429 393 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Upp1P52624 311 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Rad23aP54726 363 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 TankP70347 448 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Cyb5r4Q3TDX8 528 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Cfhr2Q4LDF6 332 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Zdhhc17Q80TN5 632 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Erlin2Q8BFZ9 340 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 AtripQ8BMG1 785 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 LarsQ8BMJ2 1178 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Ankrd52Q8BTI7 1076 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 IntS13Q8QZV7 732 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Cyp4f13Q99N19 523 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Q9CQC3 228 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Adamts5Q9R001 930 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 PignQ9R1S3 931 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Pld1Q9Z280 1074 aa20.87■□□□□ 0.93
Lig3-204ENSMUST00000131537 Igkv5-43A0A0B4J1J2 115 aa20.86■□□□□ 0.93
Lig3-204ENSMUST00000131537 Tcp10bE9PYJ0 438 aa20.86■□□□□ 0.93
Lig3-204ENSMUST00000131537 Tcp10cE9Q046 482 aa20.86■□□□□ 0.93
Lig3-204ENSMUST00000131537 Gm10719E9Q7T3 227 aa20.86■□□□□ 0.93
Lig3-204ENSMUST00000131537 Olfr1022L7MTT3 315 aa20.86■□□□□ 0.93
Lig3-204ENSMUST00000131537 Vmn2r77L7N2B7 854 aa20.86■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms