RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Smcr8Q3UMB5 935 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ticam2Q8BJQ4 232 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Vps50Q8CI71 964 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ing3Q8VEK6 421 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Unc45aQ99KD5 944 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ttll9A2APC3 461 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Pold2O35654 469 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Fam172aQ3TNH5 417 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gpd1lQ3ULJ0 351 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Atp13a3Q5XF89 1219 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tmem270Q6UJB9 264 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Chsy1Q6ZQ11 800 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Q80WR5 230 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Pphln1Q8K2H1 381 aaKnown RBP16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Dnajc9Q91WN1 259 aaKnown RBP16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Psma4Q9R1P0 261 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Krt6bQ9Z331 562 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Rrn3B2RS91 656 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tmem45a2B7ZWJ5 289 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Klf6O08584 283 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Olfr8Q60892 310 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tll1Q62381 1013 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Magee1Q6PCZ4 918 aaKnown RBP16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Slitrk1Q810C1 696 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Krr1Q8BGA5 380 aaKnown RBP16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Prdm8Q8BZ97 687 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Sept12Q9D451 317 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Psma3O70435 255 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 CartptP56388 129 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Plekha8Q80W71 519 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Dusp4Q8BFV3 398 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Amz1Q8BVF9 502 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Rnf8Q8VC56 488 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 NclnQ8VCM8 563 aaKnown RBP16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Snapc2Q91XA5 359 aa16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Mettl16Q9CQG2 553 aaKnown RBP16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ruvbl2Q9WTM5 463 aaKnown RBP16.05■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gm8298J3QPI0 401 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 PolP11369 1281 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Chrna5Q2MKA5 467 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Trmt1Q3TX08 663 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Nudt18Q3U2V3 323 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Lrrc55Q3UY51 311 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Mxd3Q80US8 206 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ccdc134Q8C7V8 229 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Oas1cQ924S2 362 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Mrpl46Q9EQI8 283 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ddx20Q9JJY4 825 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ap4s1Q9WVL1 144 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Prex1Q69ZK0 1650 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Olfr212Q7TS33 327 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Brat1Q8C3R1 822 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ccdc28bQ8CEG5 200 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Wdr98Q8VC42 657 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Serbp1Q9CY58 407 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Jph2Q9ET78 696 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Angpt2O35608 496 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tmem39bQ810L4 492 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tmem260Q8BMD6 703 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ythdf3Q8BYK6 585 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tmem82Q8R115 356 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Fam32aQ9CR80 112 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Tex12Q9CR81 123 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gm3095E9Q058 166 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 BhmtO35490 407 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Cyp2j6O54750 501 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ap3d1O54774 1199 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 ItgalP24063 1163 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Egfl8Q6GUQ1 293 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 PygbQ8CI94 843 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 GatbQ99JT1 557 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 MceeQ9D1I5 178 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gpatch1Q9DBM1 930 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Edf1Q9JMG1 148 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Dctn3Q9Z0Y1 186 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Pex5O09012 639 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 PuraP42669 321 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Gp1bbP56400 206 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Plk1Q07832 603 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 ZufspQ3T9Z9 577 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Adrbk2Q3UYH7 688 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 StilQ60988 1262 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Nyap1Q6PFX7 833 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Atxn2lQ7TQH0 1049 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Btbd10Q80X66 475 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Slc6a15Q8BG16 729 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Sumf1Q8R0F3 372 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 ScgnQ91WD9 276 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Cep72Q9D3R3 646 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Sgf29Q9DA08 293 aaKnown RBP16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Trim10Q9WUH5 489 aa16.04■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Ptpn11P35235 597 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Mapk1P63085 358 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 RelaQ04207 549 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Bcap31Q61335 245 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Dpysl3Q62188 570 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 WlsQ6DID7 541 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Dyrk4Q8BI55 632 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 D630039A03RikQ8K0M7 236 aa16.03■□□□□ 0.16
Pcdha9-201ENSMUST00000115659 Kct2Q8K201 259 aa16.03■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms