RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Tbc1d10bQ8BHL3 798 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Enpp4Q8BTJ4 456 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 AA792892Q8C6S1 278 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ccdc142Q8CAI1 738 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ca9Q8VHB5 437 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 MrgpreQ91ZB7 310 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Maged1Q9QYH6 775 aaKnown RBP16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Diaph3Q9Z207 1171 aa16.58■□□□□ 0.24
Trim39-203ENSMUST00000113706 Dennd5bA2RSQ0 1274 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gnrh1P13562 90 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Drg1P32233 367 aaKnown RBP16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Smpd1Q04519 627 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Uimc1Q5U5Q9 727 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gpsm1Q6IR34 673 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Arhgap11aQ80Y19 987 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Btbd9Q8C726 612 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Slc39a3Q99K24 317 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Rfwd2Q9R1A8 733 aaKnown RBP16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm382B1AXN3 1250 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Srsf11E9Q6E5 511 aaKnown RBP16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Acot1O55137 419 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 VimP20152 466 aaKnown RBP16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Irx1P81068 480 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cd163Q2VLH6 1121 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Krt12Q64291 487 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Tmem220Q8BP07 167 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Aldh5a1Q8BWF0 523 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Nek8Q91ZR4 698 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 MutyhQ99P21 515 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Nme7Q9QXL8 395 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Phf2Q9WTU0 1096 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Mroh4G3X8W1 983 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Casp14O89094 257 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Myl1P05977 188 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Atp13a5Q3TYU2 1216 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Vmn2r26Q6TAC4 855 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Sh3tc2Q80VA5 1289 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Q80WR5 230 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 RalylQ8BTF8 293 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Vps37cQ8R105 352 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Tmprss4Q8VCA5 435 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Them5Q9CQJ0 248 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam3aQ9D8T0 230 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Rpl9-ps1S4R1R7 191 aa16.57■□□□□ 0.24
Trim39-203ENSMUST00000113706 Glb1P23780 647 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ccndbp1Q3TVC7 356 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 C2cd5Q7TPS5 1016 aaKnown RBP16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Zdhhc17Q80TN5 632 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ythdf3Q8BYK6 585 aaKnown RBP16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Castor2Q8CAB8 329 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Oxct1Q9D0K2 520 aaKnown RBP16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Abcg8Q9DBM0 673 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Prl2a1Q9JHK0 228 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Sgk1Q9WVC6 431 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm13276A0A087WR18 182 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ms4a4aA0A087WRT7 236 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fpr-rs4A4FUQ5 323 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Vmn2r84D3YWE3 849 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm10722F6VLK5 217 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm7694J3QNH8 270 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 AmhP27106 555 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 VegfbP49766 207 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Inpp4bQ6P1Y8 924 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Dnali1Q8BVN8 258 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 ItpkaQ8R071 459 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cox16Q9CR63 106 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cpxm1Q9Z100 722 aa16.56■□□□□ 0.24
Trim39-203ENSMUST00000113706 Zfr2E9Q5M4 874 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Mup13L7N222 235 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Nek2O35942 443 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 PrlP06879 226 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Btg3P50615 252 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam207aP58468 219 aaKnown RBP16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Pde1bQ01065 535 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Kif11Q6P9P6 1052 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Uts2bQ765I1 113 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Rell1Q8K2J7 272 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Fam114a2Q8VE88 497 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Olfr356Q8VFP5 315 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Alg13Q9D8C3 1166 aaKnown RBP16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Iqcf1Q9D9K8 182 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Scyl1Q9EQC5 806 aaKnown RBP16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Usp35M0QWN7 1009 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 SpertQ32MG2 446 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Olfr212Q7TS33 327 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cplx4Q80WM3 160 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ankrd45Q810N6 248 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Orai2Q8BH10 250 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Serpina3bQ8BYY9 420 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Def6Q8C2K1 630 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Olfr532Q8VGT4 309 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 TraipQ8VIG6 470 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 RpainQ9CWY9 219 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 MsraQ9D6Y7 233 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Lactbl1S4R213 581 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Gm45861A0A1B0GRY3 1923 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Zc3h12bG3X9I7 835 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Kcnk16G5E845 292 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Cbfa2t2O70374 594 aa16.55■□□□□ 0.24
Trim39-203ENSMUST00000113706 Ces1cP23953 554 aa16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms