RNA–Protein interactions for RNA: ENSMUST00000100069.8

Scn3a-202, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 8,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-202ENSMUST00000100069 Rab27aQ9ERI2 221 aa7.12□□□□□ -1.27
Scn3a-202ENSMUST00000100069 FignQ9ERZ6 759 aa7.12□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ercc4Q9QZD4 917 aa7.12□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Arih1Q9Z1K5 555 aa7.12□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Zfp804bA0A0G2JGH6 1343 aa7.12□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Gm17093F6XGJ4 214 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ccnd1P25322 295 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 GclcP97494 637 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Itga1Q3V3R4 1179 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Sfmbt2Q5DTW2 938 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 2900092C05RikQ5I0V9 184 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Lilrb4Q64281 335 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 3830417A13RikQ8BQJ2 303 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Zfp398Q8BV16 643 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Efl1Q8C0D5 1127 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Pdlim2Q8R1G6 349 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Alg1Q921Q3 482 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Arhgef28P97433 1693 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Pramef20B1ARV6 477 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Eif2ak2Q03963 515 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 1700061G19RikQ08EE8 705 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 MregQ6NVG5 214 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Fbxl13Q8CDU4 790 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Cox18Q8VC74 331 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Vps11Q91W86 941 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Mrpl9Q99N94 265 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Igf2bp3Q9CPN8 579 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Oxct1Q9D0K2 520 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Coro7Q9D2V7 922 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Coro1cQ9WUM4 474 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Grin2dQ03391 1323 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Wdr72D3YYM4 1114 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Cyp2c69E9PXC3 491 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 JundP15066 341 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ccnd2P30280 289 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Fmr1P35922 614 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Rad54lP70270 747 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Gspt2Q149F3 632 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 CamkvQ3UHL1 512 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Fam198aQ3UY90 562 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Garnl3Q3V0G7 1038 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Plk4Q64702 925 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Atg16l2Q6KAU8 623 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Cpa5Q8R4H4 436 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Pcdhgb5Q91XX5 926 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 PpidQ9CR16 370 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Klra17Q9JMA4 273 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Oas1eA0A0J9YV76 386 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Gm20695H3BLK7 282 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Cdk4P30285 303 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Nol4P60954 483 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Hpcal1P62748 193 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Gpd1lQ3ULJ0 351 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Rcsd1Q3UZA1 412 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Usp13Q5BKP2 858 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Tlr11Q6R5P0 926 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Chsy1Q6ZQ11 800 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Trim50Q810I2 483 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Tbc1d10cQ8C9V1 444 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Gtf2a1lQ8R4I4 468 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Taldo1Q93092 337 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Smim11aQ99J19 55 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Hebp1Q9R257 190 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 AdgbG3UZ78 1657 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Pcna-ps2A0A140T8V5 261 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Clk2O35491 499 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 CflarO35732 481 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Cdk7Q03147 346 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Tnni3kQ5GIG6 834 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Dnajc1Q61712 552 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ubxn10Q8BG34 277 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 TbcelQ8C5W3 424 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Depdc7Q91WS7 511 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Atp6v1b1Q91YH6 513 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Nol3Q9D1X0 220 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Sept12Q9D451 317 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Gm5799E9Q2M1 201 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 R3hdm1E9Q9Q2 1135 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ikzf3O08900 507 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Asna1O54984 348 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ap1g2O88512 791 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Traf2P39429 501 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 PkmP52480 531 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Rps6ka6Q7TPS0 764 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 SpidrQ8BGX7 933 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 DnerQ8JZM4 737 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Pglyrp2Q8VCS0 530 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Agap3Q8VHH5 910 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Smok2bQ9QYZ3 484 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Smok2aQ9QYZ6 504 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 B020011L13RikA0A087WQI7 412 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Erich1E9PY43 332 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ncam1P13595 1115 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 PrkceP16054 737 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Phka1P18826 1241 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Nedd4P46935 887 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Ddx17Q501J6 650 aaKnown RBP7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Zhx3Q8C0Q2 951 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Zbtb8bQ8CII0 484 aa7.11□□□□□ -1.27
Scn3a-202ENSMUST00000100069 Unc5bQ8K1S3 945 aa7.11□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms