RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Cdh23Q99PF4 3354 aa10.41□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Olfr1305A2AVW3 312 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Zfp174B9EJW5 407 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Gm1758F6VZZ1 202 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Vmn2r111K7N674 857 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Nr2c2P49117 596 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Stmn1P54227 149 aaKnown RBP10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Adcyap1r1P70205 496 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Gsdmc2Q2KHK6 480 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Gsdmc4Q3TR54 480 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 EfsQ64355 560 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 RbfaQ6P3B9 350 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Wbp1lQ8BGW2 348 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Sh3rf3Q8C120 878 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Wdr27Q8C5V5 780 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Gsdmc3Q8CB12 480 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fam114a2Q8VE88 497 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fam76aQ922G2 307 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Rtn3Q9ES97 964 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Wdr54Q9R0D8 334 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Rhox3cA2AWM0 215 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fam71aB7XG49 585 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Card6E9PWH2 1175 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Gm5160F8VPN3 147 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Gm3182K7N6T8 263 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Rhox3hL7MU37 215 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Klra1P20937 262 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Ap1m1P35585 423 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Ighmbp2P40694 993 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 YwhazP63101 245 aaKnown RBP10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Nsun2Q1HFZ0 757 aaKnown RBP10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fam172aQ3TNH5 417 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Olfml2bQ3V1G4 746 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Rhox3aQ4TU90 215 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Myo6Q64331 1265 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Defb34Q7TNV8 81 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Zbtb6Q8K088 423 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Wdr98Q8VC42 657 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Tpgs1Q99MS8 303 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 DmgdhQ9DBT9 869 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Nmnat1Q9EPA7 285 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 DpysQ9EQF5 519 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Caln1Q9JJG7 219 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Pja1O55176 578 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 PrnpP04925 254 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Timm13P62075 95 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Hoxd13P70217 339 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Tatdn1Q6P8M1 295 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Mib1Q80SY4 1006 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Baiap3Q80TT2 1134 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Ctxn3Q8BXZ0 80 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fam118bQ8C569 351 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Parp10Q8CIE4 960 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Ccdc71Q8VEG0 433 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fbxo32Q9CPU7 355 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Kif12Q9D2Z8 642 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Xab2Q9DCD2 855 aaKnown RBP10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Grk1Q9WVL4 564 aa10.4□□□□□ -0.74
Ccdc38-201ENSMUST00000092215 Fam209A2APA5 170 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm14525B1AZA0 212 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm2012B1B0R1 212 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ccdc8D3YZV8 685 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 ChkbO55229 394 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Snx12O70493 165 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 P01652 108 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Mucl2P02815 138 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Mup5P11591 180 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gas2P11862 314 aaKnown RBP10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Fut7Q11131 389 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 H2-Q2Q4KN81 360 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 PighQ5M9N4 188 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 GstcdQ5RL51 634 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm14819Q62478 212 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Zfp512bQ6PHP4 879 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cdc23Q8BGZ4 597 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Creb3l2Q8BH52 521 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ttc24Q8BYG0 334 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Unc45aQ99KD5 944 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dpp3Q99KK7 738 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dlgap1Q9D415 992 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 NckipsdQ9ESJ4 714 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm21293E9Q4G9 266 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gsg1l2M0QWL6 290 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Pax3P24610 479 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 TankP70347 448 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gas6Q61592 674 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ccdc117Q6PB51 277 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm5622Q810Q0 167 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dars2Q8BIP0 653 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Fermt3Q8K1B8 665 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Mcoln1Q99J21 580 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Lpin3Q99PI4 848 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Atg7Q9D906 698 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 A930018M24RikB7ZMY3 218 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gm10722F6VLK5 217 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Birc5O70201 140 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 TertO70372 1122 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Sh3bp1P55194 680 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Usp46P62069 366 aa10.39□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Vav2Q60992 868 aa10.39□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms