RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Dcdc2Q5DU00 475 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm5431Q5NCB3 844 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sik1Q60670 779 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tcf12Q61286 706 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Krt15Q61414 452 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Map3k10Q66L42 940 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hdac10Q6P3E7 666 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hmgb4Q6P8W9 181 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dusp16Q6PCP3 660 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ntrk3Q6VNS1 825 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rmnd5aQ80YQ8 391 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 DglucyQ8BH86 617 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ttc19Q8CC21 365 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Etv3Q8R4Z4 513 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rpap2Q8VC34 614 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Smg8Q8VE18 991 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Olfr617Q8VGA1 318 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Serpinb9gQ8VHQ1 377 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rnf135Q9CWS1 417 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 CoasyQ9DBL7 563 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cdc42ep4Q9JM96 349 aaKnown RBP10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Olfr485A0A140LJF5 317 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 JhyE9Q793 770 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm16427J3QN52 483 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cdh1P09803 884 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ephx2P34914 554 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 TgfbiP82198 683 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 9930111J21Rik1Q5SVP0 844 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Epha7Q61772 998 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Lyve1Q8BHC0 318 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gpr180Q8BPS4 441 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 MaelQ8BVN9 434 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Slc38a7Q8BWH0 463 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 CopaQ8CIE6 1224 aaKnown RBP10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sh3kbp1Q8R550 709 aaKnown RBP10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ttc36Q8VBW8 186 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gpn2Q8VEJ1 310 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gmpr2Q99L27 348 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ppp1r3aQ99MR9 1089 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pfdn1Q9CWM4 122 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rsph14Q9D3W1 341 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 1700018B08RikQ9DA83 213 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rhox9Q9EQM5 227 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Stk19Q9JHN8 254 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 NumbQ9QZS3 653 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gipc1Q9Z0G0 333 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Phlpp1Q8CHE4 1687 aa10.09□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 SmoktcrA2KF29 484 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm12794L7MTS5 483 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Lamp2P17047 415 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 FynP39688 537 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Il12bP43432 335 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 PolgP54099 1218 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Traf3ip1Q149C2 625 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Arid5aQ3U108 590 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Psg29Q3URN6 468 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Stip1Q60864 543 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Kpna1Q60960 538 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Atxn2lQ7TQH0 1049 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Btnl1Q7TST0 509 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nucks1Q80XU3 234 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Prox2Q8BII1 593 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nkiras1Q8CEC5 192 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Klhl36Q8R124 613 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nrbf2Q8VCQ3 287 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tnip2Q99JG7 430 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Nxf1Q99JX7 618 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mtfr1Q99MB2 328 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Bap1Q99PU7 728 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tdrd12Q9CWU0 1215 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Zcrb1Q9CZ96 217 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ttc33Q9D6K7 262 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Olfr703Q9EPF5 319 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gpr45Q9EQQ4 373 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 DexiQ9WUQ7 95 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pds5aQ6A026 1332 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Myh11O08638 1972 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm6370A0A0G2JGX9 315 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Slc4a11A2AJN7 862 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm8994E9PV04 411 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Gm6309L7N481 315 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Galnt1O08912 559 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Camk4P08414 469 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cdh3P10287 822 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Cd3gP11942 182 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Eno2P17183 434 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Wdr36Q3TAQ9 899 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ppp2r2bQ6ZWR4 443 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Usp6nlQ80XC3 819 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mup21Q80YX8 181 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Palm2Q8BR92 376 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 LRWD1Q8BUI3 648 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Polr2bQ8CFI7 1174 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Arel1Q8CHG5 823 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Plekhh3Q8VCE9 796 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Bhmt2Q91WS4 363 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Ptbp2Q91Z31 531 aaKnown RBP10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Tmem9Q9CR23 183 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Pi16Q9ET66 489 aa10.08□□□□□ -0.8
Hmgb1-201ENSMUST00000085546 Mmp19Q9JHI0 527 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms