RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Ccnb1ip1D3Z3K2 276 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Gm6408J3QNG1 320 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 PlaaP27612 794 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Erbb2P70424 1256 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Myo19Q5SV80 963 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Rnf139Q7TMV1 668 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Exd1Q8CDF7 570 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Smpd3Q9JJY3 655 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Bscl2Q9Z2E9 383 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Slfn14V9GXG1 899 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Cyp2j6O54750 501 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Pde4aO89084 844 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 IqcmQ149I8 489 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Pih1d3Q3KNI6 218 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Lcn3Q62471 182 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Nqo1Q64669 274 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Znf280dQ68FE8 974 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Prrg3Q6PAQ9 231 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Olfr792Q7TRH9 311 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Zswim5Q80TC6 1188 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 P2ry10Q8BFU7 328 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Samd4aQ8CBY1 711 aaKnown RBP15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Klhl25Q8R2P1 589 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Rxfp2Q91ZZ5 737 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Q9CQF4 240 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Slc25a13Q9QXX4 676 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 NfkbiaQ9Z1E3 314 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Casz1Q9CWL2 1761 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Zscan4-ps1A0A1C7CYV3 506 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Prss51A0A286YDY8 319 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Zscan4dA7KBS4 506 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Ifi207E9Q3L4 978 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Grem2O88273 168 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Zscan4fQ3URS2 506 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Scube1Q6NZL8 1018 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Zscan4cQ80VJ6 506 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 1700001J03RikQ80ZR8 219 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Rnf219Q8K2Y0 722 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Mtmr4Q91XS1 1190 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Pcdhb1Q91Y08 818 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Fastkd2Q922E6 689 aaKnown RBP15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Capn10Q9ESK3 666 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Olfr271-ps1A0A1L1SQH2 283 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Pramef20B1ARV6 477 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Lmnb1P14733 588 aaKnown RBP15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Magee2Q52KG3 523 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Tex24Q5DP50 351 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Fam71bQ5STT6 665 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Chsy1Q6ZQ11 800 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 4933409G03RikQ8C5U0 320 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Bhlhe22Q8C6A8 355 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 D630039A03RikQ8K0M7 236 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Acat1Q8QZT1 424 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Mrpl2Q9D773 306 aaKnown RBP15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Atp6v1e1P50518 226 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Rnf113a2Q14B01 337 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Nutm2Q3V0C3 733 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Slc47a1Q8K0H1 567 aa15.1■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 XdhQ00519 1335 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Epas1P97481 874 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Smtnl2Q8CI12 456 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Utp6Q8VCY6 597 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Ndufv1Q91YT0 464 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Mrps15Q9DC71 258 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Tecpr2Q3UH45 1423 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Serpina6Q06770 397 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Kctd21Q3URF8 260 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Gpr141Q7TQP0 305 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Ms4a5Q810P8 197 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Lsm14aQ8K2F8 462 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Mfsd5Q921Y4 450 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Josd2Q9CR30 188 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 4930513O06RikQ9D549 161 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Pnpla6Q3TRM4 1355 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Zfp788E9Q980 884 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Rrm2P11157 390 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Serpinh1P19324 417 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 PkmP52480 531 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Arpc4P59999 168 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Usp46P62069 366 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Tfcp2l1Q3UNW5 479 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Lsm8Q6ZWM4 96 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Pqlc1Q80XM9 271 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Caskin2Q8VHK1 1201 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Sntg2Q925E0 539 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 GatbQ99JT1 557 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Prpf19Q99KP6 504 aaKnown RBP15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Gins4Q99LZ3 223 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 CoprsQ9CQ13 173 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Copg1Q9QZE5 874 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Eddm13E9Q7F5 164 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Ppargc1aO70343 797 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 AfpP02772 605 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Psen1P49769 467 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Egfl8Q6GUQ1 293 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Rasal3Q8C2K5 1041 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 BfarQ8R079 450 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Ces4aQ8R0W5 563 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Agap3Q8VHH5 910 aa15.09■□□□□ 0.01
Pcdha1-201ENSMUST00000070797 Klhl28Q9CR40 571 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 99 ms