RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Srgap2Q91Z67 1071 aa8.05□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Sugt1Q9CX34 336 aa8.05□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Atf7ipQ7TT18 1306 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Nav1Q8CH77 1875 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 4930467E23RikD3Z1P8 350 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 CckarO08786 436 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 RrhO35214 337 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Hax1O35387 280 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Acvr2aP27038 513 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Lrig1P70193 1091 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Kcnd1Q03719 651 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Prrx2Q06348 247 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Tekt4Q149S1 447 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 YdjcQ14BV6 310 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 EspnlQ3UYR4 1005 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Itga1Q3V3R4 1179 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Pik3r5Q5SW28 871 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Dyrk1aQ61214 763 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Sema5aQ62217 1077 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Tmcc1Q69ZZ6 649 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Podnl1Q6P3Y9 559 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Q7TT23 1179 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Upp2Q8CGR7 320 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Rassf8Q8CJ96 419 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Mib2Q8R516 973 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Ackr4Q924I3 350 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Iqcf3Q9D498 203 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Mapk9Q9WTU6 423 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Abcc12Q80WJ6 1366 aa8.04□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Igsf1Q7TQA1 1317 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Ric1Q69ZJ7 1422 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Znf541Q0GGX2 1363 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 A0A1W2P6Q8 802 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Gm9048A0A1W2P7H4 802 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 A0A1W2P7Z8 802 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Gm9046A0A1W2P855 802 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Prrt4B2RU40 902 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Gm5930D3Z257 264 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Smpd2O70572 419 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 P01723 117 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Gsx1P31315 261 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Mdga1Q0PMG2 940 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Mfsd2bQ3T9M1 494 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Fam198bQ3UPI1 517 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Shroom1Q5SX79 823 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Sim2Q61079 657 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Mc2rQ64326 296 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Ankfy1Q810B6 1169 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Rhox11Q810N8 206 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Prss50Q8BLH5 439 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Prkaa2Q8BRK8 552 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Abhd18Q8C1A9 464 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Gm42417Q8K1D0 126 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Wasf3Q8VHI6 501 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Tex29Q9DA77 186 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Zfyve19Q9DAZ9 389 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Sh2d2aQ9QXK9 374 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 ChrdQ9Z0E2 948 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Clic1Q9Z1Q5 241 aaKnown RBP8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Col11a2Q64739 1736 aa8.03□□□□□ -1.12
Ccdc54-201ENSMUST00000062439 Dhx8A2A4P0 1244 aaKnown RBP8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Ano3A2AHL1 981 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Sept4P28661 478 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Olfr6P34986 316 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Gdf6P43028 454 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Slc9a1Q61165 820 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Cramp1Q6PG95 1285 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Synpo2lQ8BWB1 975 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Trim9Q8C7M3 817 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Tcerg1Q8CGF7 1100 aaKnown RBP8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 TwnkQ8CIW5 685 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Epm2aip1Q8VEH5 606 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Nudt8Q9CR24 210 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Lman2Q9DBH5 358 aaKnown RBP8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Thsd1Q9JM61 851 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Tlr4Q9QUK6 835 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Hsf4Q9R0L1 492 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Adam24Q9R160 761 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 AtrnQ9WU60 1428 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 CoblQ5NBX1 1337 aaKnown RBP8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Mapk8ip3Q9ESN9 1337 aa8.02□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Dlg5E9Q9R9 1921 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Zswim8Q3UHH1 1832 aaKnown RBP8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Gm21964A0A1W2P7S4 437 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Wdr95D3Z7A8 784 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Nek2O35942 443 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Parp1P11103 1013 aaKnown RBP8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Rps7P62082 194 aaKnown RBP8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Gabrb3P63080 473 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Grm1P97772 1199 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Neurl1bQ0MW30 546 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Q3UTZ3 580 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Znf366Q6NS86 746 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Slc39a4Q78IQ7 660 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 SugctQ7TNE1 436 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 DlatQ8BMF4 642 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 NarsQ8BP47 559 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Tyw3Q8BSA9 257 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 Slc39a13Q8BZH0 361 aa8.01□□□□□ -1.13
Ccdc54-201ENSMUST00000062439 CopaQ8CIE6 1224 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms