RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 DstykQ6XUX1 927 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 March4Q80TE3 409 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fkbp6Q91XW8 327 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pcdha10Q91Y20 946 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Trps1Q925H1 1281 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Snx24Q9CRB0 169 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rnf135Q9CWS1 417 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Atad1Q9D5T0 361 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Capn10Q9ESK3 666 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pck1Q9Z2V4 622 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Scgb2b12S4R2L0 112 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Speer2E9Q9U2 264 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gdf7P43029 461 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 PfkmP47857 780 aaKnown RBP9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dynlt1P51807 113 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cbx1P83917 185 aaKnown RBP9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 B020004J07RikQ3UTC0 476 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tspyl3Q3UYP3 334 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Klra3Q64329 266 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tbc1d12Q6A039 696 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Akap7Q7TN79 314 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Impg2Q80XH2 1243 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slitrk1Q810C1 696 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Zmiz2Q8CIE2 920 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Hip1Q8VD75 1029 aaKnown RBP9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fam114a2Q8VE88 497 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 TraipQ8VIG6 470 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Pth2rQ91V95 546 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tpgs1Q99MS8 303 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Thumpd2Q9CZB3 528 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fam114a1Q9D281 569 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Kank3Q9Z1P7 791 aa9.11□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm36028A0A0U1RPM1 299 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ssxb9A2BI93 185 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rfx8D3YU81 596 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gm10719E9Q7T3 227 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Nek2O35942 443 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Trappc3O55013 180 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 NrlP54846 237 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Znf800Q0VEE6 662 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ift20Q61025 132 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Sh3tc2Q80VA5 1289 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slc51bQ80WK2 128 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fam109aQ8BH49 266 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gcfc2Q8BKT3 769 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rsl1d1Q8BVY0 452 aaKnown RBP9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ca12Q8CI85 354 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Cep19Q9CQA8 163 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Hsd3b7Q9EQC1 369 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Sept5Q9Z2Q6 369 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 TpteG5E8H5 664 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Serpinb9O08797 374 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Vti1aO89116 217 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Mc4rP56450 332 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 YwhazP63101 245 aaKnown RBP9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tubb4bP68372 445 aaKnown RBP9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Flt3Q00342 1000 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 GaltQ03249 379 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Serac1Q3U213 654 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Shkbp1Q6P7W2 704 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Baiap3Q80TT2 1134 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Slc9a7Q8BLV3 726 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Efl1Q8C0D5 1127 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 CtbsQ8R242 366 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Vmn1r218Q8R261 298 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gle1Q8R322 699 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Olfr1502Q8VG66 316 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Socs7Q8VHQ2 579 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Unc45aQ99KD5 944 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 MutyhQ99P21 515 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 PmpcbQ9CXT8 489 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ddit4Q9D3F7 229 aa9.1□□□□□ -0.95
Trim39-201ENSMUST00000042717 Aldh1a1P24549 501 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ephb4P54761 987 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 NcanP55066 1268 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Il1rapl1P59823 695 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Fam109bQ14B98 259 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 March5Q3KNM2 278 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Syce2Q505B8 171 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ndrg1Q62433 394 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Gtf2a2Q80ZM7 109 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Nod1Q8BHB0 953 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ldhal6bQ8BVP2 382 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 OafQ8QZR4 282 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Vmn1r64Q8R2B8 320 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Tpd52l2Q9CYZ2 220 aaKnown RBP9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Rin2Q9D684 903 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Dydc1Q9D9T0 175 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Strn3Q9ERG2 796 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Angptl3Q9R182 455 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 AspgA0JNU3 564 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Calcoco2A2A6M5 331 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 A930018M24RikB7ZMY3 218 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ccnyl1D3YUJ3 367 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Ccdc8D3YZV8 685 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 E9QMW4 1145 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Calhm3J3QMI4 347 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Enpp1P06802 906 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 Zfp42P22227 288 aa9.09□□□□□ -0.95
Trim39-201ENSMUST00000042717 TankP70347 448 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms