RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Stt3bQ3TDQ1 823 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mrgprx2Q3UG50 352 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ddx5Q61656 614 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gba2Q69ZF3 918 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Xlr3bQ6P205 226 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Moxd2Q7TT41 619 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ifi205aQ8CGE8 404 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tmem82Q8R115 356 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 RnpepQ8VCT3 650 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 AvenQ9D9K3 342 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 EporP14753 507 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ppp3ccP48455 513 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Uchl4P58321 233 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 NficP70255 439 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gabpb1Q00420 383 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pcgf5Q3UK78 256 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Hspa1aQ61696 641 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zfp512bQ6PHP4 879 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Nipal1Q8BMW7 416 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 4921511C20RikQ8BVT7 469 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tmem161bQ8C2L6 487 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Prr33Q8C494 260 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Sash3Q8K352 380 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fam187aQ9D3R5 417 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Gid8Q9D7M1 228 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Oma1Q9D8H7 521 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Snx5Q9D8U8 404 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Q9D9D9 101 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rbck1Q9WUB0 508 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Wdr46Q9Z0H1 622 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 S1pr4Q9Z0L1 386 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Astn1Q61137 1302 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Vmn2r55G3UWZ4 781 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Vmn2r53L7N473 806 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Magea1O89006 320 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Serpina3kP07759 418 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Eps8Q08509 821 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Klhdc10Q6PAR0 439 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Prkaa2Q8BRK8 552 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Zswim7Q9CWQ2 152 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rasgef1cQ9D300 466 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tcirg1Q9JHF5 834 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Magea2Q9R2A2 320 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 B020011L13RikA0A087WQI7 412 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ssxb9A2BI93 185 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Erich2E9Q1A6 463 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Chil3O35744 398 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 ThraP63058 492 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mfsd14aP70187 490 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Krt80Q0VBK2 452 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Hsdl2Q2TPA8 490 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Lrrc14bQ3UJB3 510 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 E330034G19RikQ3UWX6 351 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 SpdyaQ5IBH7 310 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Dlg4Q62108 724 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ppp1r12bQ8BG95 976 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc44a2Q8BY89 706 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Stx5Q8K1E0 355 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mta1Q8K4B0 715 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Cox18Q8VC74 331 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Olfr393Q8VGR6 312 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rtfdc1Q99K95 307 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Trap1Q9CQN1 706 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 MtrexQ9CZU3 1040 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Rpn2Q9DBG6 631 aaKnown RBP10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Sh2b2Q9JID9 621 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Als2Q920R0 1651 aa10.66□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Klhl33G3UW92 533 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PurbO35295 324 aaKnown RBP10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc2a4P14142 509 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Fgfr1P16092 822 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mov10P23249 1004 aaKnown RBP10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Calb2Q08331 271 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ogfod1Q3U0K8 545 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc16a10Q3U9N9 512 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 PpatQ8CIH9 517 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mageb3Q9D2H4 330 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Ppil2Q9D787 521 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 DcpsQ9DAR7 338 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Scgb2b12S4R2L0 112 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Apold1E9Q0X2 246 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 AF366264G3X9P9 502 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Guca2bO09051 106 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc12a1P55014 1095 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Kcna2P63141 499 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Slc13a5Q67BT3 572 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Tas2r109Q7M707 316 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Olfr698Q7TRN4 311 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Snap47Q8R570 413 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Trmt11Q9CWH5 460 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Mrps9Q9D7N3 390 aaKnown RBP10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Scube2Q9JJS0 997 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Msh5Q9QUM7 833 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Phlpp1Q8CHE4 1687 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Vmn2r39L7N2E5 861 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Oas1aP11928 367 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Akr1b7P21300 316 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pdcd2P46718 343 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Sult1e1P49891 295 aa10.65□□□□□ -0.7
Ccdc40-201ENSMUST00000035935 Pcbp1P60335 356 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms