RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W YMR321CQ04898 105 aa1.05□□□□□ -2.24
PEP12YOR036W LSM6Q06406 86 aaKnown RBP1.05□□□□□ -2.24
PEP12YOR036W YCL048W-AQ2V2Q2 79 aa1.05□□□□□ -2.24
PEP12YOR036W YGL041C-BQ3E750 60 aa1.05□□□□□ -2.24
PEP12YOR036W UFD4P33202 1483 aa1.05□□□□□ -2.24
PEP12YOR036W ARO1P08566 1588 aaKnown RBP1.04□□□□□ -2.24
PEP12YOR036W HMRA1P0CY11 126 aa1.04□□□□□ -2.24
PEP12YOR036W YHL005CP38752 130 aa1.04□□□□□ -2.24
PEP12YOR036W YHR138CP38841 114 aaPredicted RBP1.04□□□□□ -2.24
PEP12YOR036W VPS55P47111 140 aa1.04□□□□□ -2.24
PEP12YOR036W POC4Q12245 148 aaPredicted RBP1.04□□□□□ -2.24
PEP12YOR036W YHR213W-BQ8TGK1 99 aa1.04□□□□□ -2.24
PEP12YOR036W ENV10Q99382 181 aa1.04□□□□□ -2.24
PEP12YOR036W SPT6P23615 1451 aaKnown RBP1.04□□□□□ -2.24
PEP12YOR036W BCK1Q01389 1478 aa1.04□□□□□ -2.24
PEP12YOR036W SNQ2P32568 1501 aaKnown RBP1.04□□□□□ -2.24
PEP12YOR036W YOR093CQ12275 1648 aa1.04□□□□□ -2.24
PEP12YOR036W YRF1-1P0CX20 1796 aa1.03□□□□□ -2.24
PEP12YOR036W YRF1-5P0CX21 1796 aa1.03□□□□□ -2.24
PEP12YOR036W YRF1-8P0CX22 1796 aa1.03□□□□□ -2.24
PEP12YOR036W RIM15P43565 1770 aa1.03□□□□□ -2.24
PEP12YOR036W YER188C-AP0C0V2 99 aa1.03□□□□□ -2.24
PEP12YOR036W MRPL31P14063 131 aaPredicted RBP1.03□□□□□ -2.24
PEP12YOR036W RPL37BP51402 88 aaKnown RBP1.03□□□□□ -2.24
PEP12YOR036W RSM19P53733 91 aaPredicted RBP1.03□□□□□ -2.24
PEP12YOR036W YGR240C-AQ3E786 66 aa1.03□□□□□ -2.24
PEP12YOR036W RRT15Q3E811 62 aa1.03□□□□□ -2.24
PEP12YOR036W YHR213W-AQ8TGT4 77 aa1.03□□□□□ -2.24
PEP12YOR036W KOG1P38873 1557 aa1.03□□□□□ -2.24
PEP12YOR036W GCN2P15442 1659 aa1.03□□□□□ -2.24
PEP12YOR036W MOT1P32333 1867 aa1.03□□□□□ -2.25
PEP12YOR036W CCW14O13547 238 aa1.02□□□□□ -2.25
PEP12YOR036W VTH1P40438 1549 aa1.02□□□□□ -2.25
PEP12YOR036W EMC5P40540 141 aa1.02□□□□□ -2.25
PEP12YOR036W MSL1P40567 111 aaPredicted RBP1.02□□□□□ -2.25
PEP12YOR036W VTH2P40890 1549 aa1.02□□□□□ -2.25
PEP12YOR036W YOL118CQ08259 102 aa1.02□□□□□ -2.25
PEP12YOR036W HFA1P32874 2273 aa1.01□□□□□ -2.25
PEP12YOR036W SNF2P22082 1703 aa1.01□□□□□ -2.25
PEP12YOR036W HIR3P47171 1648 aa1.01□□□□□ -2.25
PEP12YOR036W BPT1P14772 1559 aa1.01□□□□□ -2.25
PEP12YOR036W PDR5P33302 1511 aaKnown RBP1.01□□□□□ -2.25
PEP12YOR036W YMR141CP40211 102 aa1.01□□□□□ -2.25
PEP12YOR036W PAU5P43575 122 aa1.01□□□□□ -2.25
PEP12YOR036W MRPS12P53732 153 aa1.01□□□□□ -2.25
PEP12YOR036W YDR029WQ12111 104 aa1.01□□□□□ -2.25
PEP12YOR036W HUG1Q6Q5K6 68 aa1.01□□□□□ -2.25
PEP12YOR036W STT4P37297 1900 aa1.01□□□□□ -2.25
PEP12YOR036W ROX3P25046 220 aa1□□□□□ -2.25
PEP12YOR036W YCR095W-AQ3E787 52 aa1□□□□□ -2.25
PEP12YOR036W ATG2P53855 1592 aa1□□□□□ -2.25
PEP12YOR036W SLH1P53327 1967 aaKnown RBP0.99□□□□□ -2.25
PEP12YOR036W GCV3P39726 170 aaPredicted RBP0.99□□□□□ -2.25
PEP12YOR036W CWP2P43497 92 aa0.99□□□□□ -2.25
PEP12YOR036W IMP2P46972 177 aa0.99□□□□□ -2.25
PEP12YOR036W YDR042CQ03205 200 aa0.99□□□□□ -2.25
PEP12YOR036W YDR119W-AQ2V2P9 66 aa0.99□□□□□ -2.25
PEP12YOR036W YMR175W-AQ3E766 64 aa0.99□□□□□ -2.25
PEP12YOR036W SUS1Q6WNK7 96 aa0.99□□□□□ -2.25
PEP12YOR036W DNF3Q12674 1656 aa0.99□□□□□ -2.25
PEP12YOR036W LAA1P39526 2014 aa0.99□□□□□ -2.25
PEP12YOR036W SSS1P35179 80 aa0.98□□□□□ -2.25
PEP12YOR036W LSM2P38203 95 aaKnown RBP0.98□□□□□ -2.25
PEP12YOR036W YNL198CP40166 100 aa0.98□□□□□ -2.25
PEP12YOR036W LCL1Q02786 101 aa0.98□□□□□ -2.25
PEP12YOR036W YOL131WQ08270 108 aa0.98□□□□□ -2.25
PEP12YOR036W ECM12O13529 151 aa0.97□□□□□ -2.25
PEP12YOR036W RSM18P40033 138 aa0.97□□□□□ -2.25
PEP12YOR036W SNA2P56508 79 aa0.97□□□□□ -2.25
PEP12YOR036W COX12Q01519 83 aa0.97□□□□□ -2.25
PEP12YOR036W YDR210WQ03482 75 aa0.97□□□□□ -2.25
PEP12YOR036W YPR145C-AQ2V2P0 78 aa0.97□□□□□ -2.25
PEP12YOR036W YIL134C-AQ45U18 67 aa0.97□□□□□ -2.25
PEP12YOR036W BUD3P25558 1636 aa0.97□□□□□ -2.25
PEP12YOR036W YCR085WP25650 117 aa0.96□□□□□ -2.26
PEP12YOR036W RPA12P32529 125 aaKnown RBP0.96□□□□□ -2.26
PEP12YOR036W YJR128WP47162 119 aa0.96□□□□□ -2.26
PEP12YOR036W YPL038W-AQ3E7B4 63 aa0.96□□□□□ -2.26
PEP12YOR036W DNF2Q12675 1612 aa0.96□□□□□ -2.26
PEP12YOR036W PDR15Q04182 1529 aaKnown RBP0.95□□□□□ -2.26
PEP12YOR036W YLR255CO13574 117 aa0.95□□□□□ -2.26
PEP12YOR036W PAI3P01094 68 aa0.95□□□□□ -2.26
PEP12YOR036W PAU6P0CE90 120 aa0.95□□□□□ -2.26
PEP12YOR036W PAU18P0CE91 120 aa0.95□□□□□ -2.26
PEP12YOR036W RPL43AP0CX25 92 aaKnown RBP0.95□□□□□ -2.26
PEP12YOR036W RPL43BP0CX26 92 aa0.95□□□□□ -2.26
PEP12YOR036W MRPL38P35996 138 aaPredicted RBP0.95□□□□□ -2.26
PEP12YOR036W ICY1Q04329 127 aa0.95□□□□□ -2.26
PEP12YOR036W VMA9Q3E7B6 73 aa0.95□□□□□ -2.26
PEP12YOR036W YNR034W-AQ3E841 98 aa0.95□□□□□ -2.26
PEP12YOR036W URB1P34241 1764 aaKnown RBP0.94□□□□□ -2.26
PEP12YOR036W MRP17P28778 131 aa0.94□□□□□ -2.26
PEP12YOR036W SWM2P40342 146 aa0.94□□□□□ -2.26
PEP12YOR036W COX19Q3E731 98 aa0.94□□□□□ -2.26
PEP12YOR036W FIG2P25653 1609 aa0.93□□□□□ -2.26
PEP12YOR036W IML1P47170 1584 aa0.93□□□□□ -2.26
PEP12YOR036W YBL071CP38185 102 aa0.93□□□□□ -2.26
PEP12YOR036W YBR292CP38357 123 aa0.93□□□□□ -2.26
PEP12YOR036W AIM19P40502 157 aa0.93□□□□□ -2.26
PEP12YOR036W YIL086CP40503 102 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms