RNA–Protein interactions for RNA: YNL024C-A

KSH1, Transcript of Essential protein suggested to function early in the secretory pathway, yeastyeast

Gene KSH1, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KSH1YNL024C-A NHP2P32495 156 aaPredicted RBP4.68□□□□□ -1.66
KSH1YNL024C-A NRG2P38082 220 aa4.68□□□□□ -1.66
KSH1YNL024C-A VTC1P40046 129 aaRIP-Chip data4.68□□□□□ -1.66not detected
KSH1YNL024C-A YNL198CP40166 100 aa4.68□□□□□ -1.66
KSH1YNL024C-A RPR2P40571 144 aa4.68□□□□□ -1.66
KSH1YNL024C-A YFR057WP43625 151 aa4.68□□□□□ -1.66
KSH1YNL024C-A MDN1Q12019 4910 aaKnown RBP4.68□□□□□ -1.66
KSH1YNL024C-A RPL33AP05744 107 aaKnown RBP4.67□□□□□ -1.66
KSH1YNL024C-A RPC10P40422 70 aa4.67□□□□□ -1.66
KSH1YNL024C-A RPL33BP41056 107 aaKnown RBP4.67□□□□□ -1.66
KSH1YNL024C-A CWP2P43497 92 aa4.67□□□□□ -1.66
KSH1YNL024C-A TMA7Q3E764 64 aaKnown RBP4.67□□□□□ -1.66
KSH1YNL024C-A YOR020W-AQ3E824 90 aa4.67□□□□□ -1.66
KSH1YNL024C-A YBR219CP38317 127 aa4.66□□□□□ -1.66
KSH1YNL024C-A YHR130CP38834 111 aa4.66□□□□□ -1.66
KSH1YNL024C-A YAL065CO13511 128 aa4.64□□□□□ -1.67
KSH1YNL024C-A YIA6P40556 373 aa4.64□□□□□ -1.67
KSH1YNL024C-A UBC11P52492 156 aa4.64□□□□□ -1.67
KSH1YNL024C-A EOS1P53938 366 aa4.64□□□□□ -1.67
KSH1YNL024C-A RGM1Q00453 211 aa4.64□□□□□ -1.67
KSH1YNL024C-A RTC6O14464 93 aa4.63□□□□□ -1.67
KSH1YNL024C-A AUA1P32450 94 aa4.63□□□□□ -1.67
KSH1YNL024C-A YMR320WQ04897 101 aa4.63□□□□□ -1.67
KSH1YNL024C-A YNL190WP53872 204 aa4.62□□□□□ -1.67
KSH1YNL024C-A RPL29P05747 59 aaPredicted RBP4.61□□□□□ -1.67
KSH1YNL024C-A CDC43P18898 376 aa4.61□□□□□ -1.67
KSH1YNL024C-A COX10P21592 462 aa4.61□□□□□ -1.67
KSH1YNL024C-A YDR115WQ04598 105 aa4.6□□□□□ -1.67
KSH1YNL024C-A YLL066W-BQ8TGJ7 56 aa4.6□□□□□ -1.67
KSH1YNL024C-A CPR1P14832 162 aaKnown RBP4.59□□□□□ -1.67
KSH1YNL024C-A ABF2Q02486 183 aa4.59□□□□□ -1.67
KSH1YNL024C-A YPL257WQ08974 193 aa4.59□□□□□ -1.67
KSH1YNL024C-A YLL006W-AQ3E814 58 aa4.59□□□□□ -1.67
KSH1YNL024C-A ARO2P28777 376 aaKnown RBP4.58□□□□□ -1.68
KSH1YNL024C-A MID2P36027 376 aa4.58□□□□□ -1.68
KSH1YNL024C-A MRPL24P36525 258 aaPredicted RBP4.58□□□□□ -1.68
KSH1YNL024C-A PBA1Q05778 276 aa4.58□□□□□ -1.68
KSH1YNL024C-A HPA2Q06592 156 aa4.58□□□□□ -1.68
KSH1YNL024C-A HUR1P45820 110 aa4.57□□□□□ -1.68
KSH1YNL024C-A AQY2P0CD90 149 aa4.56□□□□□ -1.68
KSH1YNL024C-A YRA2P36036 203 aaKnown RBP RIP-Chip data4.56□□□□□ -1.68not detected
KSH1YNL024C-A MVB12P42939 101 aa4.56□□□□□ -1.68
KSH1YNL024C-A DIF1O13577 133 aa4.55□□□□□ -1.68
KSH1YNL024C-A STF1P01098 86 aa4.55□□□□□ -1.68
KSH1YNL024C-A YBL039W-BP0C268 59 aa4.55□□□□□ -1.68
KSH1YNL024C-A SVP26P38869 228 aa4.55□□□□□ -1.68
KSH1YNL024C-A YFL019CP43576 117 aa4.55□□□□□ -1.68
KSH1YNL024C-A KNH1P50112 268 aa4.55□□□□□ -1.68
KSH1YNL024C-A SMD1Q02260 146 aaPredicted RBP4.55□□□□□ -1.68
KSH1YNL024C-A YLR236CA0A023PZG4 107 aa4.54□□□□□ -1.68
KSH1YNL024C-A YCR085WP25650 117 aa4.54□□□□□ -1.68
KSH1YNL024C-A YAL064WP39711 94 aa4.54□□□□□ -1.68
KSH1YNL024C-A ICY1Q04329 127 aa4.54□□□□□ -1.68
KSH1YNL024C-A RPL26AP05743 127 aaKnown RBP4.53□□□□□ -1.68
KSH1YNL024C-A YBL081WP38180 368 aaKnown RBP4.53□□□□□ -1.68
KSH1YNL024C-A RPL26BP53221 127 aaKnown RBP4.53□□□□□ -1.68
KSH1YNL024C-A IRC21Q04772 201 aa4.53□□□□□ -1.68
KSH1YNL024C-A YGL041C-BQ3E750 60 aa4.53□□□□□ -1.68
KSH1YNL024C-A YAR023CD6VPM8 179 aa4.52□□□□□ -1.69
KSH1YNL024C-A UBC4P15731 148 aa4.52□□□□□ -1.69
KSH1YNL024C-A ATX1P38636 73 aa4.52□□□□□ -1.69
KSH1YNL024C-A AIM19P40502 157 aa4.52□□□□□ -1.69
KSH1YNL024C-A YPL229WQ99395 206 aa4.52□□□□□ -1.69
KSH1YNL024C-A RPP2AP05319 106 aaKnown RBP4.51□□□□□ -1.69
KSH1YNL024C-A OST2P46964 130 aa4.51□□□□□ -1.69
KSH1YNL024C-A SLO1Q3E784 85 aa4.51□□□□□ -1.69
KSH1YNL024C-A MSA2P36157 363 aa4.5□□□□□ -1.69
KSH1YNL024C-A RPA12P32529 125 aaKnown RBP4.49□□□□□ -1.69
KSH1YNL024C-A YKL069WP36088 180 aa4.49□□□□□ -1.69
KSH1YNL024C-A SFT1P43682 97 aa4.49□□□□□ -1.69
KSH1YNL024C-A RUB1Q03919 77 aa4.49□□□□□ -1.69
KSH1YNL024C-A YNL162W-AQ3E7A8 72 aa4.49□□□□□ -1.69
KSH1YNL024C-A SNA2P56508 79 aa4.48□□□□□ -1.69
KSH1YNL024C-A RRT15Q3E811 62 aa4.48□□□□□ -1.69
KSH1YNL024C-A DSE2P38844 325 aa4.47□□□□□ -1.69
KSH1YNL024C-A YDR029WQ12111 104 aa4.46□□□□□ -1.7
KSH1YNL024C-A Q0032Q9ZZX7 96 aa4.46□□□□□ -1.7
KSH1YNL024C-A ECM12O13529 151 aa4.45□□□□□ -1.7
KSH1YNL024C-A YJR107C-AP0CT86 78 aa4.45□□□□□ -1.7
KSH1YNL024C-A YLR307C-AQ3E825 87 aa4.45□□□□□ -1.7
KSH1YNL024C-A FYV5P25585 152 aa4.44□□□□□ -1.7
KSH1YNL024C-A YOR034C-AQ3E735 80 aa4.44□□□□□ -1.7
KSH1YNL024C-A TSC3Q3E790 80 aa4.44□□□□□ -1.7
KSH1YNL024C-A YNL042W-BQ3E7Z2 85 aa4.44□□□□□ -1.7
KSH1YNL024C-A YER039C-AP0CD97 72 aa4.43□□□□□ -1.7
KSH1YNL024C-A PBI2P0CT04 75 aaKnown RBP4.43□□□□□ -1.7
KSH1YNL024C-A IGD1P43598 195 aa4.43□□□□□ -1.7
KSH1YNL024C-A SKI6P46948 246 aaPredicted RBP4.43□□□□□ -1.7
KSH1YNL024C-A YDR381C-AQ3E6R5 114 aa4.43□□□□□ -1.7
KSH1YNL024C-A INO4P13902 151 aa4.42□□□□□ -1.7
KSH1YNL024C-A YBR230W-AQ3E762 66 aa4.42□□□□□ -1.7
KSH1YNL024C-A YJL127C-BQ3E828 52 aa4.42□□□□□ -1.7
KSH1YNL024C-A MPC3P53311 146 aa4.41□□□□□ -1.7
KSH1YNL024C-A YDR034C-AP0C289 58 aa4.4□□□□□ -1.71
KSH1YNL024C-A SPT4P32914 102 aaPredicted RBP4.4□□□□□ -1.71
KSH1YNL024C-A SMP1P38128 452 aa4.4□□□□□ -1.71
KSH1YNL024C-A GAT4P40569 121 aa4.4□□□□□ -1.71
KSH1YNL024C-A YGL193CP53097 103 aa4.4□□□□□ -1.71
KSH1YNL024C-A RSM19P53733 91 aaPredicted RBP4.4□□□□□ -1.71
KSH1YNL024C-A ATP18P81450 59 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms