RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C SRL1Q08673 210 aa5.71□□□□□ -1.5
NDE1YMR145C YAL064W-BO13512 126 aa5.7□□□□□ -1.5
NDE1YMR145C YER188C-AP0C0V2 99 aa5.7□□□□□ -1.5
NDE1YMR145C SED1Q01589 338 aa5.7□□□□□ -1.5
NDE1YMR145C YMR122CQ03879 124 aa5.7□□□□□ -1.5
NDE1YMR145C YGR035W-AQ45U48 73 aa5.7□□□□□ -1.5
NDE1YMR145C OST5Q92316 86 aa5.7□□□□□ -1.5
NDE1YMR145C FYV5P25585 152 aa5.69□□□□□ -1.5
NDE1YMR145C MRPL39P36533 70 aa5.69□□□□□ -1.5
NDE1YMR145C YGR018CP53211 109 aa5.69□□□□□ -1.5
NDE1YMR145C YNL190WP53872 204 aa5.69□□□□□ -1.5
NDE1YMR145C PRM7Q12459 698 aa5.69□□□□□ -1.5
NDE1YMR145C YGL258W-AQ3E740 77 aa5.69□□□□□ -1.5
NDE1YMR145C YDR182W-AQ3E796 67 aa5.68□□□□□ -1.5
NDE1YMR145C RPL36BO14455 100 aaKnown RBP5.67□□□□□ -1.5
NDE1YMR145C RPL36AP05745 100 aaPredicted RBP5.67□□□□□ -1.5
NDE1YMR145C MRPS12P53732 153 aa5.67□□□□□ -1.5
NDE1YMR145C IRC21Q04772 201 aa5.67□□□□□ -1.5
NDE1YMR145C IRC19Q07843 230 aa5.67□□□□□ -1.5
NDE1YMR145C CCW14O13547 238 aa5.66□□□□□ -1.5
NDE1YMR145C YMR141CP40211 102 aa5.66□□□□□ -1.5
NDE1YMR145C YBL071CP38185 102 aa5.66□□□□□ -1.5
NDE1YMR145C SHU1P38751 150 aa5.66□□□□□ -1.5
NDE1YMR145C NOP10Q6Q547 58 aaPredicted RBP5.66□□□□□ -1.5
NDE1YMR145C YGR045CP53229 120 aa5.65□□□□□ -1.51
NDE1YMR145C FHN1P53279 174 aa5.64□□□□□ -1.51
NDE1YMR145C YPR153WQ06537 140 aa5.64□□□□□ -1.51
NDE1YMR145C RPS23AP0CX29 145 aaKnown RBP5.63□□□□□ -1.51
NDE1YMR145C RPS23BP0CX30 145 aa5.63□□□□□ -1.51
NDE1YMR145C YFL015CP43578 164 aa5.63□□□□□ -1.51
NDE1YMR145C YBR182C-AQ8TGU6 64 aa5.63□□□□□ -1.51
NDE1YMR145C ATP15P21306 62 aa5.63□□□□□ -1.51
NDE1YMR145C YMR321CQ04898 105 aa5.62□□□□□ -1.51
NDE1YMR145C YOR020W-AQ3E824 90 aa5.62□□□□□ -1.51
NDE1YMR145C YOL166W-AQ8TGJ1 51 aa5.62□□□□□ -1.51
NDE1YMR145C YOR008C-AQ3E7B9 74 aa5.61□□□□□ -1.51
NDE1YMR145C YFR032C-BQ8TGU2 87 aa5.61□□□□□ -1.51
NDE1YMR145C WWM1P43582 211 aaKnown RBP5.6□□□□□ -1.51
NDE1YMR145C RGM1Q00453 211 aa5.6□□□□□ -1.51
NDE1YMR145C LEE1Q02799 301 aaKnown RBP5.6□□□□□ -1.51
NDE1YMR145C UTH1P36135 365 aa5.59□□□□□ -1.51
NDE1YMR145C QCR10P37299 77 aa5.59□□□□□ -1.51
NDE1YMR145C KRE9P39005 276 aa5.59□□□□□ -1.51
NDE1YMR145C URM1P40554 99 aaPredicted RBP5.59□□□□□ -1.51
NDE1YMR145C YMR254CQ04838 102 aa5.59□□□□□ -1.51
NDE1YMR145C YOL014WQ08110 124 aa5.59□□□□□ -1.51
NDE1YMR145C RPS30AP0CX33 63 aaKnown RBP5.59□□□□□ -1.52
NDE1YMR145C RPS30BP0CX34 63 aaKnown RBP5.59□□□□□ -1.52
NDE1YMR145C YCR043CP25361 127 aa5.59□□□□□ -1.52
NDE1YMR145C YHL037CP38733 133 aa5.59□□□□□ -1.52
NDE1YMR145C HSP150P32478 413 aa5.58□□□□□ -1.52
NDE1YMR145C NCE101Q02820 53 aa5.58□□□□□ -1.52
NDE1YMR145C TRS23Q03784 219 aa5.58□□□□□ -1.52
NDE1YMR145C YLR342W-AQ3E810 57 aa5.58□□□□□ -1.52
NDE1YMR145C YJR107C-AP0CT86 78 aa5.57□□□□□ -1.52
NDE1YMR145C ARC15P40518 154 aaRIP-Chip data5.57□□□□□ -1.52not detected
NDE1YMR145C RPR2P40571 144 aa5.57□□□□□ -1.52
NDE1YMR145C YIR020CP40575 100 aa5.57□□□□□ -1.52
NDE1YMR145C YCR022CP25620 114 aa5.56□□□□□ -1.52
NDE1YMR145C YKL097CP34245 136 aa5.56□□□□□ -1.52
NDE1YMR145C YDR461C-AQ2V2P7 80 aa5.56□□□□□ -1.52
NDE1YMR145C HOT13P36078 116 aa5.53□□□□□ -1.52
NDE1YMR145C RRT1P38192 103 aa5.53□□□□□ -1.52
NDE1YMR145C REE1P40893 198 aa5.53□□□□□ -1.52
NDE1YMR145C FYV12Q08559 129 aa5.53□□□□□ -1.52
NDE1YMR145C YLR111WQ12528 110 aa5.53□□□□□ -1.52
NDE1YMR145C YOR034C-AQ3E735 80 aa5.52□□□□□ -1.53
NDE1YMR145C YLR236CA0A023PZG4 107 aa5.51□□□□□ -1.53
NDE1YMR145C YMR244WQ04018 355 aa5.51□□□□□ -1.53
NDE1YMR145C SOM1Q05676 74 aa5.51□□□□□ -1.53
NDE1YMR145C LIP1Q03579 150 aa5.5□□□□□ -1.53
NDE1YMR145C YER145C-AA0A023PYF4 145 aa5.49□□□□□ -1.53
NDE1YMR145C QCR8P08525 94 aa5.49□□□□□ -1.53
NDE1YMR145C RPL38P49167 78 aaKnown RBP5.49□□□□□ -1.53
NDE1YMR145C ATP18P81450 59 aa5.49□□□□□ -1.53
NDE1YMR145C YOR032W-AQ8TGS1 66 aa5.49□□□□□ -1.53
NDE1YMR145C EDC2P40023 145 aaPredicted RBP5.47□□□□□ -1.53
NDE1YMR145C SPC1P46965 94 aa5.47□□□□□ -1.53
NDE1YMR145C YJR146WP47174 117 aa5.47□□□□□ -1.53
NDE1YMR145C YIL156W-BQ2V2P4 73 aa5.47□□□□□ -1.53
NDE1YMR145C TVP23P38962 199 aa5.47□□□□□ -1.53
NDE1YMR145C TMC1Q08422 150 aaPredicted RBP5.47□□□□□ -1.53
NDE1YMR145C MRPL38P35996 138 aaPredicted RBP5.46□□□□□ -1.54
NDE1YMR145C YCR095W-AQ3E787 52 aa5.44□□□□□ -1.54
NDE1YMR145C YBL008W-AQ3E821 79 aa5.43□□□□□ -1.54
NDE1YMR145C BLM10P43583 2143 aa5.42□□□□□ -1.54
NDE1YMR145C YAR023CD6VPM8 179 aa5.42□□□□□ -1.54
NDE1YMR145C BPH1P25356 2167 aa5.41□□□□□ -1.54
NDE1YMR145C YDR010CQ12426 110 aa5.41□□□□□ -1.54
NDE1YMR145C YFR009W-AP0C5M9 85 aa5.4□□□□□ -1.54
NDE1YMR145C RPS11AP0CX47 156 aaKnown RBP5.4□□□□□ -1.54
NDE1YMR145C RPS11BP0CX48 156 aaKnown RBP5.4□□□□□ -1.54
NDE1YMR145C MRX7P53869 86 aa5.4□□□□□ -1.54
NDE1YMR145C HUB1Q6Q546 73 aa5.4□□□□□ -1.54
NDE1YMR145C YJL027CP47063 138 aaPredicted RBP5.4□□□□□ -1.55
NDE1YMR145C YNL042W-BQ3E7Z2 85 aa5.4□□□□□ -1.55
NDE1YMR145C YSF3P0C074 85 aaPredicted RBP5.39□□□□□ -1.55
NDE1YMR145C MRPS8Q03799 155 aa5.39□□□□□ -1.55
NDE1YMR145C YGL149WP53116 101 aa5.38□□□□□ -1.55
NDE1YMR145C YJL197C-AP0C5P0 93 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms