RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C YJR107C-AP0CT86 78 aa0.48□□□□□ -2.33
NUP188YML103C YOR105WQ08504 108 aa0.48□□□□□ -2.33
NUP188YML103C RPA12P32529 125 aaKnown RBP0.48□□□□□ -2.33
NUP188YML103C GDB1Q06625 1536 aa0.48□□□□□ -2.33
NUP188YML103C RPA190P10964 1664 aaKnown RBP0.47□□□□□ -2.33
NUP188YML103C YKL065W-AQ2V2P2 73 aa0.47□□□□□ -2.33
NUP188YML103C YBR201C-AQ2V2Q3 67 aa0.47□□□□□ -2.33
NUP188YML103C YIL134C-AQ45U18 67 aa0.47□□□□□ -2.33
NUP188YML103C LTE1P07866 1435 aa0.47□□□□□ -2.33
NUP188YML103C ATP18P81450 59 aa0.47□□□□□ -2.33
NUP188YML103C RPC10P40422 70 aa0.47□□□□□ -2.33
NUP188YML103C YNL190WP53872 204 aa0.47□□□□□ -2.33
NUP188YML103C URB1P34241 1764 aaKnown RBP0.47□□□□□ -2.33
NUP188YML103C AUA1P32450 94 aa0.46□□□□□ -2.34
NUP188YML103C YMR082CQ04276 118 aa0.46□□□□□ -2.34
NUP188YML103C RRT15Q3E811 62 aa0.46□□□□□ -2.34
NUP188YML103C PAU23Q07987 124 aa0.46□□□□□ -2.34
NUP188YML103C PAU17Q12370 124 aa0.46□□□□□ -2.34
NUP188YML103C YCR085WP25650 117 aa0.45□□□□□ -2.34
NUP188YML103C YBR032WP38223 100 aa0.45□□□□□ -2.34
NUP188YML103C CWP2P43497 92 aa0.45□□□□□ -2.34
NUP188YML103C SGF11Q03067 99 aa0.45□□□□□ -2.34
NUP188YML103C LAA1P39526 2014 aa0.45□□□□□ -2.34
NUP188YML103C PDR10P51533 1564 aa0.45□□□□□ -2.34
NUP188YML103C YAL065CO13511 128 aa0.45□□□□□ -2.34
NUP188YML103C YGL194C-AQ2V2P6 80 aa0.45□□□□□ -2.34
NUP188YML103C MDN1Q12019 4910 aaKnown RBP0.44□□□□□ -2.34
NUP188YML103C SEC7P11075 2009 aaKnown RBP0.44□□□□□ -2.34
NUP188YML103C YRF1-1P0CX20 1796 aa0.44□□□□□ -2.34
NUP188YML103C YRF1-5P0CX21 1796 aa0.44□□□□□ -2.34
NUP188YML103C YRF1-8P0CX22 1796 aa0.44□□□□□ -2.34
NUP188YML103C YPR108W-AQ3E7B3 70 aa0.44□□□□□ -2.34
NUP188YML103C BRR2P32639 2163 aaKnown RBP0.44□□□□□ -2.34
NUP188YML103C MMS22Q06164 1454 aa0.43□□□□□ -2.34
NUP188YML103C SEC16P48415 2195 aaKnown RBP0.43□□□□□ -2.34
NUP188YML103C YRF1-2P40105 1681 aa0.43□□□□□ -2.34
NUP188YML103C YFR009W-AP0C5M9 85 aa0.43□□□□□ -2.34
NUP188YML103C EDC1P53080 175 aaPredicted RBP0.43□□□□□ -2.34
NUP188YML103C YOR314WQ12506 109 aa0.43□□□□□ -2.34
NUP188YML103C YMR122W-AQ3E842 84 aa0.43□□□□□ -2.34
NUP188YML103C POL1P13382 1468 aa0.43□□□□□ -2.34
NUP188YML103C RIM15P43565 1770 aa0.43□□□□□ -2.34
NUP188YML103C OLI1P61829 76 aa0.42□□□□□ -2.34
NUP188YML103C NOP10Q6Q547 58 aaPredicted RBP0.42□□□□□ -2.34
NUP188YML103C YDR381C-AQ3E6R5 114 aa0.42□□□□□ -2.34
NUP188YML103C QCR9P22289 66 aa0.41□□□□□ -2.34
NUP188YML103C YGR025WP53216 100 aa0.41□□□□□ -2.34
NUP188YML103C YLR146W-AQ2V2P1 62 aa0.41□□□□□ -2.34
NUP188YML103C YMR175W-AQ3E766 64 aa0.41□□□□□ -2.34
NUP188YML103C MYO1P08964 1928 aa0.41□□□□□ -2.34
NUP188YML103C TY1B-BLQ12490 1755 aa0.41□□□□□ -2.34
NUP188YML103C BNI1P41832 1953 aa0.4□□□□□ -2.34
NUP188YML103C LSM2P38203 95 aaKnown RBP0.4□□□□□ -2.35
NUP188YML103C SWM2P40342 146 aa0.4□□□□□ -2.35
NUP188YML103C ATP17Q06405 101 aa0.4□□□□□ -2.35
NUP188YML103C ESC1Q03661 1658 aaKnown RBP0.4□□□□□ -2.35
NUP188YML103C POC4Q12245 148 aaPredicted RBP0.39□□□□□ -2.35
NUP188YML103C DNF3Q12674 1656 aa0.39□□□□□ -2.35
NUP188YML103C PAU7P39545 55 aa0.39□□□□□ -2.35
NUP188YML103C FAS2P19097 1887 aaKnown RBP0.39□□□□□ -2.35
NUP188YML103C ESP1Q03018 1630 aa0.39□□□□□ -2.35
NUP188YML103C URA2P07259 2214 aaKnown RBP0.39□□□□□ -2.35
NUP188YML103C YPR145C-AQ2V2P0 78 aa0.38□□□□□ -2.35
NUP188YML103C HUB1Q6Q546 73 aa0.38□□□□□ -2.35
NUP188YML103C YHR213W-AQ8TGT4 77 aa0.38□□□□□ -2.35
NUP188YML103C SNF2P22082 1703 aa0.37□□□□□ -2.35
NUP188YML103C BLM10P43583 2143 aa0.37□□□□□ -2.35
NUP188YML103C YBR016WP38216 128 aa0.37□□□□□ -2.35
NUP188YML103C YSP2Q06681 1438 aa0.37□□□□□ -2.35
NUP188YML103C KOG1P38873 1557 aa0.37□□□□□ -2.35
NUP188YML103C XRN1P22147 1528 aaKnown RBP0.37□□□□□ -2.35
NUP188YML103C PAI3P01094 68 aa0.37□□□□□ -2.35
NUP188YML103C SMC4Q12267 1418 aa0.36□□□□□ -2.35
NUP188YML103C MOT1P32333 1867 aa0.36□□□□□ -2.35
NUP188YML103C YIL156W-BQ2V2P4 73 aa0.36□□□□□ -2.35
NUP188YML103C YKL018C-AQ3E7A7 99 aa0.36□□□□□ -2.35
NUP188YML103C YOR008C-AQ3E7B9 74 aa0.36□□□□□ -2.35
NUP188YML103C APC1P53886 1748 aa0.36□□□□□ -2.35
NUP188YML103C SIP18P50263 79 aa0.35□□□□□ -2.35
NUP188YML103C MMS1Q06211 1407 aa0.35□□□□□ -2.35
NUP188YML103C PRP8P33334 2413 aaKnown RBP0.35□□□□□ -2.35
NUP188YML103C TY1B-BRQ12193 1756 aa0.35□□□□□ -2.35
NUP188YML103C POL2P21951 2222 aaKnown RBP0.35□□□□□ -2.35
NUP188YML103C MLP1Q02455 1875 aaKnown RBP0.34□□□□□ -2.35
NUP188YML103C YOR011W-AQ3E807 68 aa0.34□□□□□ -2.35
NUP188YML103C COA2Q3E823 68 aa0.34□□□□□ -2.35
NUP188YML103C SSS1P35179 80 aa0.34□□□□□ -2.36
NUP188YML103C HKR1P41809 1802 aa0.34□□□□□ -2.36
NUP188YML103C YDR246W-AQ3E763 66 aa0.34□□□□□ -2.36
NUP188YML103C YGR121W-AQ3E816 71 aa0.34□□□□□ -2.36
NUP188YML103C YFL041W-AQ3E817 63 aa0.34□□□□□ -2.36
NUP188YML103C YDR119W-AQ2V2P9 66 aa0.33□□□□□ -2.36
NUP188YML103C SIN3P22579 1536 aa0.33□□□□□ -2.36
NUP188YML103C SPI1P40092 148 aa0.33□□□□□ -2.36
NUP188YML103C YMR001C-AQ8TGS9 76 aa0.33□□□□□ -2.36
NUP188YML103C TY1B-DR6P0C2I3 1755 aa0.33□□□□□ -2.36
NUP188YML103C TY1B-LR2P0C2I5 1755 aa0.33□□□□□ -2.36
NUP188YML103C TY1B-PR3P0C2J1 1755 aaKnown RBP0.33□□□□□ -2.36
NUP188YML103C TY1B-JR2P47100 1755 aaKnown RBP0.33□□□□□ -2.36
NUP188YML103C TY1B-MR1Q04214 1755 aa0.33□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 368.6 ms