RNA–Protein interactions for RNA: YLR182W

SWI6, Transcript of Transcription cofactor, yeast

Gene SWI6, Length 2,412 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWI6	YLR182W	YNL190W	P53872	204 aa		0.44	□□□□□ -2.34
SWI6	YLR182W	YPD1	Q07688	167 aa		0.44	□□□□□ -2.34
SWI6	YLR182W	FUN14	P18411	198 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	QCR9	P22289	66 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	SUA7	P29055	345 aa	Predicted RBP	0.43	□□□□□ -2.34
SWI6	YLR182W	SHG1	P38337	142 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	RPB11	P38902	120 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	SNF11	P38956	169 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	SPI1	P40092	148 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	CIN5	P40917	295 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	MRPS12	P53732	153 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	YDL241W	Q07738	123 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	YBR200W-A	Q3E755	54 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	YCR001W	P25347	104 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	AUA1	P32450	94 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	MRPL11	P36521	249 aa	Predicted RBP	0.43	□□□□□ -2.34
SWI6	YLR182W	YBL071C	P38185	102 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	AME1	P38313	324 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	YBR292C	P38357	123 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	MOG1	P47123	218 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	YOR105W	Q08504	108 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	CCW12	Q12127	133 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	WIP1	Q2V2P8	89 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	RRT15	Q3E811	62 aa		0.43	□□□□□ -2.34
SWI6	YLR182W	CCW14	O13547	238 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	RPS22A	P0C0W1	130 aa	Known RBP	0.42	□□□□□ -2.34
SWI6	YLR182W	MRPL44	P19956	98 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	FPR2	P32472	135 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YNL198C	P40166	100 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	CYB5	P40312	120 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YGL230C	P53074	147 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	GIM3	P53900	129 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YDR366C	P87287	132 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YPL067C	Q02754	198 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YDR042C	Q03205	200 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	GIM5	Q04493	163 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YOR034C-A	Q3E735	80 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	HSP12	P22943	109 aa	Known RBP	0.42	□□□□□ -2.34
SWI6	YLR182W	PAU16	P35994	123 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YKR070W	P36151	352 aa	Known RBP	0.42	□□□□□ -2.34
SWI6	YLR182W	YHR140W	P38842	239 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	ATP19	P81451	68 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YMR103C	Q04436	120 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YLR042C	Q07990	161 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YPL261C	Q08976	102 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	DAD1	Q12248	94 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	CMC4	Q3E7A9	73 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	YLL066W-B	Q8TGJ7	56 aa		0.42	□□□□□ -2.34
SWI6	YLR182W	PFY1	P07274	126 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	RPS11A	P0CX47	156 aa	Known RBP	0.41	□□□□□ -2.34
SWI6	YLR182W	RPS11B	P0CX48	156 aa	Known RBP	0.41	□□□□□ -2.34
SWI6	YLR182W	HMRA1	P0CY11	126 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	HMRA2	P0CY13	119 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.41	□□□□□ -2.34	not detected
SWI6	YLR182W	POR2	P40478	281 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	MSL1	P40567	111 aa	Predicted RBP	0.41	□□□□□ -2.34
SWI6	YLR182W	DCV1	P43595	202 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	LSM8	P47093	109 aa	Known RBP	0.41	□□□□□ -2.34
SWI6	YLR182W	MGR2	Q02889	113 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	GPI19	Q04082	140 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	HOR7	Q05827	59 aa		0.41	□□□□□ -2.34
SWI6	YLR182W	ACP1	P32463	125 aa		0.4	□□□□□ -2.34
SWI6	YLR182W	EDC1	P53080	175 aa	Predicted RBP	0.4	□□□□□ -2.34
SWI6	YLR182W	AIM11	P87275	137 aa		0.4	□□□□□ -2.34
SWI6	YLR182W	SAE3	P89114	91 aa		0.4	□□□□□ -2.34
SWI6	YLR182W	APS2	Q00381	147 aa		0.4	□□□□□ -2.34
SWI6	YLR182W	SDH7	Q04401	133 aa		0.4	□□□□□ -2.34
SWI6	YLR182W	ZEO1	Q08245	113 aa		0.4	□□□□□ -2.34
SWI6	YLR182W	YLR050C	Q12155	161 aa	Known RBP	0.4	□□□□□ -2.34
SWI6	YLR182W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.4	□□□□□ -2.34
SWI6	YLR182W	YLR342W-A	Q3E810	57 aa		0.4	□□□□□ -2.34
SWI6	YLR182W	YAL065C	O13511	128 aa		0.4	□□□□□ -2.35
SWI6	YLR182W	UBC5	P15732	148 aa		0.4	□□□□□ -2.35
SWI6	YLR182W	TVP18	Q04767	167 aa		0.4	□□□□□ -2.35
SWI6	YLR182W	PRM3	Q08931	133 aa		0.4	□□□□□ -2.35
SWI6	YLR182W	CMC2	Q3E7A4	109 aa		0.4	□□□□□ -2.35
SWI6	YLR182W	ATP5	P09457	212 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	MPC2	P38857	129 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	PAU7	P39545	55 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	SEC72	P39742	193 aa	Known RBP	0.39	□□□□□ -2.35
SWI6	YLR182W	TOS6	P48560	102 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	COX12	Q01519	83 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	YLR194C	Q05777	254 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	PAU23	Q07987	124 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	PAU17	Q12370	124 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	YOR008C-A	Q3E7B9	74 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	HAP3	P13434	144 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	HYP2	P23301	157 aa	Known RBP	0.39	□□□□□ -2.35
SWI6	YLR182W	YAL064W	P39711	94 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	GLC8	P41818	229 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	ELC1	Q03071	99 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	YMR320W	Q04897	101 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	YLR296W	Q05898	108 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	HPA2	Q06592	156 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	FYV7	Q12247	151 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	YOR097C	Q12274	175 aa	Predicted RBP	0.39	□□□□□ -2.35
SWI6	YLR182W	COA6	Q3E846	104 aa		0.39	□□□□□ -2.35
SWI6	YLR182W	RPL33A	P05744	107 aa	Known RBP	0.38	□□□□□ -2.35
SWI6	YLR182W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.38	□□□□□ -2.35
SWI6	YLR182W	INO4	P13902	151 aa		0.38	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms