RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C NHP10Q03435 203 aa0.31□□□□□ -2.36
RPL40BYKR094C SWR1Q05471 1514 aa0.3□□□□□ -2.36
RPL40BYKR094C GDB1Q06625 1536 aa0.3□□□□□ -2.36
RPL40BYKR094C COX7P10174 60 aa0.3□□□□□ -2.36
RPL40BYKR094C RPA12P32529 125 aaKnown RBP0.3□□□□□ -2.36
RPL40BYKR094C YNL198CP40166 100 aa0.3□□□□□ -2.36
RPL40BYKR094C SPC1P46965 94 aa0.3□□□□□ -2.36
RPL40BYKR094C RPL38P49167 78 aaKnown RBP0.3□□□□□ -2.36
RPL40BYKR094C BSC4P53841 131 aa0.3□□□□□ -2.36
RPL40BYKR094C RRT15Q3E811 62 aa0.3□□□□□ -2.36
RPL40BYKR094C MOT1P32333 1867 aa0.29□□□□□ -2.36
RPL40BYKR094C YNL042W-BQ3E7Z2 85 aa0.29□□□□□ -2.36
RPL40BYKR094C YKL068W-AQ3E826 78 aa0.29□□□□□ -2.36
RPL40BYKR094C MHF2Q3E829 80 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-DR6P0C2I3 1755 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-LR2P0C2I5 1755 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-PR2P0C2J0 1756 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-PR3P0C2J1 1755 aaKnown RBP0.29□□□□□ -2.36
RPL40BYKR094C TY1B-JR2P47100 1755 aaKnown RBP0.29□□□□□ -2.36
RPL40BYKR094C TY1B-MR1Q04214 1755 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-MR2Q04670 1755 aaKnown RBP0.29□□□□□ -2.36
RPL40BYKR094C TY1B-NL1Q12112 1755 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-GR1Q12141 1755 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-GR3Q12316 1755 aa0.29□□□□□ -2.36
RPL40BYKR094C TY1B-PLQ12414 1755 aaKnown RBP0.29□□□□□ -2.36
RPL40BYKR094C TY1B-ORQ92393 1755 aa0.29□□□□□ -2.36
RPL40BYKR094C NHP2P32495 156 aaPredicted RBP0.28□□□□□ -2.36
RPL40BYKR094C RPC10P40422 70 aa0.28□□□□□ -2.36
RPL40BYKR094C YMR082CQ04276 118 aa0.28□□□□□ -2.36
RPL40BYKR094C YCR075W-AQ3E830 75 aa0.28□□□□□ -2.36
RPL40BYKR094C POL1P13382 1468 aa0.28□□□□□ -2.37
RPL40BYKR094C TOM6P33448 61 aa0.27□□□□□ -2.37
RPL40BYKR094C YCL001W-BQ96VH2 84 aa0.27□□□□□ -2.37
RPL40BYKR094C Q0032Q9ZZX7 96 aa0.27□□□□□ -2.37
RPL40BYKR094C TY1B-LR3P0C2I6 1755 aaKnown RBP0.27□□□□□ -2.37
RPL40BYKR094C ECM12O13529 151 aa0.26□□□□□ -2.37
RPL40BYKR094C YBR016WP38216 128 aa0.26□□□□□ -2.37
RPL40BYKR094C LTE1P07866 1435 aa0.26□□□□□ -2.37
RPL40BYKR094C ECM29P38737 1868 aa0.25□□□□□ -2.37
RPL40BYKR094C SCP1Q08873 200 aa0.25□□□□□ -2.37
RPL40BYKR094C YBR201C-AQ2V2Q3 67 aa0.25□□□□□ -2.37
RPL40BYKR094C YMR175W-AQ3E766 64 aa0.25□□□□□ -2.37
RPL40BYKR094C ESC1Q03661 1658 aaKnown RBP0.24□□□□□ -2.37
RPL40BYKR094C YAL065CO13511 128 aa0.24□□□□□ -2.37
RPL40BYKR094C YFR009W-AP0C5M9 85 aa0.24□□□□□ -2.37
RPL40BYKR094C YJR107C-AP0CT86 78 aa0.24□□□□□ -2.37
RPL40BYKR094C YOR343CQ12484 108 aa0.24□□□□□ -2.37
RPL40BYKR094C YMR122W-AQ3E842 84 aa0.24□□□□□ -2.37
RPL40BYKR094C HKR1P41809 1802 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-DR5P0C2I2 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-PR1P0C2I9 1755 aaKnown RBP0.24□□□□□ -2.37
RPL40BYKR094C TY1B-JR1P47098 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-ML2Q03434 1755 aaKnown RBP0.24□□□□□ -2.37
RPL40BYKR094C TY1B-ER1Q03612 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-ER2Q03619 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-DR1Q03855 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-ML1Q04711 1755 aaKnown RBP0.24□□□□□ -2.37
RPL40BYKR094C TY1B-LR1Q12088 1755 aaKnown RBP0.24□□□□□ -2.37
RPL40BYKR094C TY1B-GR2Q12269 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-OLQ12273 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C TY1B-DR3Q99231 1755 aa0.24□□□□□ -2.37
RPL40BYKR094C STT4P37297 1900 aa0.23□□□□□ -2.37
RPL40BYKR094C YHR214C-DP0CX93 97 aa0.23□□□□□ -2.37
RPL40BYKR094C ATP18P81450 59 aa0.23□□□□□ -2.37
RPL40BYKR094C YOL097W-AQ3E7Y9 61 aa0.23□□□□□ -2.37
RPL40BYKR094C ESP1Q03018 1630 aa0.23□□□□□ -2.37
RPL40BYKR094C XRN1P22147 1528 aaKnown RBP0.23□□□□□ -2.37
RPL40BYKR094C FPR2P32472 135 aa0.22□□□□□ -2.37
RPL40BYKR094C EDC1P53080 175 aaPredicted RBP0.22□□□□□ -2.37
RPL40BYKR094C YGR025WP53216 100 aa0.22□□□□□ -2.37
RPL40BYKR094C SDH6Q3E785 79 aa0.22□□□□□ -2.37
RPL40BYKR094C YKL065W-AQ2V2P2 73 aa0.21□□□□□ -2.38
RPL40BYKR094C UTP10P42945 1769 aaKnown RBP0.21□□□□□ -2.38
RPL40BYKR094C YSP2Q06681 1438 aa0.21□□□□□ -2.38
RPL40BYKR094C BPH1P25356 2167 aa0.21□□□□□ -2.38
RPL40BYKR094C YCR085WP25650 117 aa0.2□□□□□ -2.38
RPL40BYKR094C YBR032WP38223 100 aa0.2□□□□□ -2.38
RPL40BYKR094C PAU23Q07987 124 aa0.2□□□□□ -2.38
RPL40BYKR094C PAU17Q12370 124 aa0.2□□□□□ -2.38
RPL40BYKR094C SKI3P17883 1432 aaKnown RBP0.2□□□□□ -2.38
RPL40BYKR094C YGL194C-AQ2V2P6 80 aa0.19□□□□□ -2.38
RPL40BYKR094C YIL134C-AQ45U18 67 aa0.19□□□□□ -2.38
RPL40BYKR094C NOP10Q6Q547 58 aaPredicted RBP0.19□□□□□ -2.38
RPL40BYKR094C MLP1Q02455 1875 aaKnown RBP0.18□□□□□ -2.38
RPL40BYKR094C MMS22Q06164 1454 aa0.18□□□□□ -2.38
RPL40BYKR094C APC1P53886 1748 aa0.17□□□□□ -2.38
RPL40BYKR094C SGF11Q03067 99 aa0.17□□□□□ -2.38
RPL40BYKR094C YOR105WQ08504 108 aa0.17□□□□□ -2.38
RPL40BYKR094C YOR314WQ12506 109 aa0.17□□□□□ -2.38
RPL40BYKR094C YPR108W-AQ3E7B3 70 aa0.17□□□□□ -2.38
RPL40BYKR094C PMD1P32634 1753 aa0.17□□□□□ -2.38
RPL40BYKR094C SEN1Q00416 2231 aaKnown RBP0.16□□□□□ -2.38
RPL40BYKR094C POC4Q12245 148 aaPredicted RBP0.16□□□□□ -2.38
RPL40BYKR094C YIL156W-BQ2V2P4 73 aa0.16□□□□□ -2.38
RPL40BYKR094C YDR381C-AQ3E6R5 114 aa0.16□□□□□ -2.38
RPL40BYKR094C MMS1Q06211 1407 aa0.14□□□□□ -2.39
RPL40BYKR094C CWP2P43497 92 aa0.14□□□□□ -2.39
RPL40BYKR094C SWM2P40342 146 aa0.13□□□□□ -2.39
RPL40BYKR094C TY2B-CP25384 1770 aa0.13□□□□□ -2.39
RPL40BYKR094C TY2B-DR1Q12472 1770 aa0.13□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms