RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W YNL198CP40166 100 aa1.05□□□□□ -2.24
SPC42YKL042W YNL042W-BQ3E7Z2 85 aa1.04□□□□□ -2.24
SPC42YKL042W YCR075W-AQ3E830 75 aa1.04□□□□□ -2.24
SPC42YKL042W POL1P13382 1468 aa1.02□□□□□ -2.25
SPC42YKL042W BSC4P53841 131 aa1.02□□□□□ -2.25
SPC42YKL042W MHF2Q3E829 80 aa1.02□□□□□ -2.25
SPC42YKL042W GDB1Q06625 1536 aa1□□□□□ -2.25
SPC42YKL042W RPL38P49167 78 aaKnown RBP1□□□□□ -2.25
SPC42YKL042W Q0032Q9ZZX7 96 aa1□□□□□ -2.25
SPC42YKL042W YCL001W-BQ96VH2 84 aa0.99□□□□□ -2.25
SPC42YKL042W SWR1Q05471 1514 aa0.99□□□□□ -2.25
SPC42YKL042W COX7P10174 60 aa0.98□□□□□ -2.25
SPC42YKL042W NHP2P32495 156 aaPredicted RBP0.98□□□□□ -2.25
SPC42YKL042W PDX3P38075 228 aaKnown RBP0.98□□□□□ -2.25
SPC42YKL042W YMR082CQ04276 118 aa0.96□□□□□ -2.26
SPC42YKL042W ECM12O13529 151 aa0.95□□□□□ -2.26
SPC42YKL042W YBR201C-AQ2V2Q3 67 aa0.95□□□□□ -2.26
SPC42YKL042W DNF3Q12674 1656 aa0.94□□□□□ -2.26
SPC42YKL042W YJR107C-AP0CT86 78 aa0.94□□□□□ -2.26
SPC42YKL042W SCP1Q08873 200 aa0.93□□□□□ -2.26
SPC42YKL042W TAO3P40468 2376 aa0.92□□□□□ -2.26
SPC42YKL042W TY1B-BRQ12193 1756 aa0.92□□□□□ -2.26
SPC42YKL042W YBR016WP38216 128 aa0.89□□□□□ -2.27
SPC42YKL042W YFR009W-AP0C5M9 85 aa0.88□□□□□ -2.27
SPC42YKL042W TOM6P33448 61 aa0.88□□□□□ -2.27
SPC42YKL042W YMR122W-AQ3E842 84 aa0.88□□□□□ -2.27
SPC42YKL042W YHR214C-DP0CX93 97 aa0.87□□□□□ -2.27
SPC42YKL042W ATX1P38636 73 aa0.87□□□□□ -2.27
SPC42YKL042W YAL065CO13511 128 aa0.86□□□□□ -2.27
SPC42YKL042W FPR2P32472 135 aa0.84□□□□□ -2.27
SPC42YKL042W YGL194C-AQ2V2P6 80 aa0.84□□□□□ -2.27
SPC42YKL042W YMR175W-AQ3E766 64 aa0.84□□□□□ -2.27
SPC42YKL042W PAU23Q07987 124 aa0.81□□□□□ -2.28
SPC42YKL042W PAU17Q12370 124 aa0.81□□□□□ -2.28
SPC42YKL042W ATP18P81450 59 aa0.8□□□□□ -2.28
SPC42YKL042W YIL134C-AQ45U18 67 aa0.79□□□□□ -2.28
SPC42YKL042W LTE1P07866 1435 aa0.79□□□□□ -2.28
SPC42YKL042W YOR343CQ12484 108 aa0.77□□□□□ -2.29
SPC42YKL042W SDH6Q3E785 79 aa0.77□□□□□ -2.29
SPC42YKL042W TY1B-PR2P0C2J0 1756 aa0.76□□□□□ -2.29
SPC42YKL042W YSP2Q06681 1438 aa0.73□□□□□ -2.29
SPC42YKL042W YKL068W-AQ3E826 78 aa0.73□□□□□ -2.29
SPC42YKL042W TY1B-DR6P0C2I3 1755 aa0.73□□□□□ -2.29
SPC42YKL042W TY1B-LR2P0C2I5 1755 aa0.73□□□□□ -2.29
SPC42YKL042W TY1B-PR3P0C2J1 1755 aaKnown RBP0.73□□□□□ -2.29
SPC42YKL042W TY1B-JR2P47100 1755 aaKnown RBP0.73□□□□□ -2.29
SPC42YKL042W TY1B-MR1Q04214 1755 aa0.73□□□□□ -2.29
SPC42YKL042W TY1B-MR2Q04670 1755 aaKnown RBP0.73□□□□□ -2.29
SPC42YKL042W TY1B-NL1Q12112 1755 aa0.73□□□□□ -2.29
SPC42YKL042W TY1B-GR1Q12141 1755 aa0.73□□□□□ -2.29
SPC42YKL042W TY1B-GR3Q12316 1755 aa0.73□□□□□ -2.29
SPC42YKL042W TY1B-PLQ12414 1755 aaKnown RBP0.73□□□□□ -2.29
SPC42YKL042W TY1B-ORQ92393 1755 aa0.73□□□□□ -2.29
SPC42YKL042W NOP10Q6Q547 58 aaPredicted RBP0.72□□□□□ -2.29
SPC42YKL042W ECM29P38737 1868 aa0.71□□□□□ -2.3
SPC42YKL042W ESC1Q03661 1658 aaKnown RBP0.69□□□□□ -2.3
SPC42YKL042W SKI3P17883 1432 aaKnown RBP0.68□□□□□ -2.3
SPC42YKL042W HKR1P41809 1802 aa0.68□□□□□ -2.3
SPC42YKL042W TY1B-LR3P0C2I6 1755 aaKnown RBP0.67□□□□□ -2.3
SPC42YKL042W MOT1P32333 1867 aa0.67□□□□□ -2.3
SPC42YKL042W YCR085WP25650 117 aa0.66□□□□□ -2.3
SPC42YKL042W SGF11Q03067 99 aa0.66□□□□□ -2.3
SPC42YKL042W STT4P37297 1900 aa0.66□□□□□ -2.3
SPC42YKL042W YIL156W-BQ2V2P4 73 aa0.65□□□□□ -2.31
SPC42YKL042W XRN1P22147 1528 aaKnown RBP0.64□□□□□ -2.31
SPC42YKL042W CWP2P43497 92 aa0.64□□□□□ -2.31
SPC42YKL042W YOL097W-AQ3E7Y9 61 aa0.64□□□□□ -2.31
SPC42YKL042W YOR105WQ08504 108 aa0.63□□□□□ -2.31
SPC42YKL042W YPR108W-AQ3E7B3 70 aa0.62□□□□□ -2.31
SPC42YKL042W EDC1P53080 175 aaPredicted RBP0.6□□□□□ -2.31
SPC42YKL042W POC4Q12245 148 aaPredicted RBP0.6□□□□□ -2.31
SPC42YKL042W UTP10P42945 1769 aaKnown RBP0.58□□□□□ -2.32
SPC42YKL042W YBR032WP38223 100 aa0.58□□□□□ -2.32
SPC42YKL042W YKL065W-AQ2V2P2 73 aa0.58□□□□□ -2.32
SPC42YKL042W YPR145C-AQ2V2P0 78 aa0.57□□□□□ -2.32
SPC42YKL042W TY1B-DR5P0C2I2 1755 aa0.57□□□□□ -2.32
SPC42YKL042W TY1B-PR1P0C2I9 1755 aaKnown RBP0.57□□□□□ -2.32
SPC42YKL042W TY1B-ER2Q03619 1755 aa0.57□□□□□ -2.32
SPC42YKL042W TY1B-DR1Q03855 1755 aa0.57□□□□□ -2.32
SPC42YKL042W TY1B-ML1Q04711 1755 aaKnown RBP0.57□□□□□ -2.32
SPC42YKL042W TY1B-LR1Q12088 1755 aaKnown RBP0.57□□□□□ -2.32
SPC42YKL042W TY1B-GR2Q12269 1755 aa0.57□□□□□ -2.32
SPC42YKL042W BPH1P25356 2167 aa0.55□□□□□ -2.32
SPC42YKL042W YOR314WQ12506 109 aa0.55□□□□□ -2.32
SPC42YKL042W YDR381C-AQ3E6R5 114 aa0.55□□□□□ -2.32
SPC42YKL042W TY1B-JR1P47098 1755 aa0.55□□□□□ -2.32
SPC42YKL042W TY1B-ML2Q03434 1755 aaKnown RBP0.55□□□□□ -2.32
SPC42YKL042W TY1B-ER1Q03612 1755 aa0.55□□□□□ -2.32
SPC42YKL042W TY1B-OLQ12273 1755 aa0.55□□□□□ -2.32
SPC42YKL042W TY1B-DR3Q99231 1755 aa0.55□□□□□ -2.32
SPC42YKL042W YGR025WP53216 100 aa0.54□□□□□ -2.32
SPC42YKL042W MMS22Q06164 1454 aa0.52□□□□□ -2.33
SPC42YKL042W ESP1Q03018 1630 aa0.46□□□□□ -2.34
SPC42YKL042W YDL022C-AP0C5L6 82 aa0.46□□□□□ -2.34
SPC42YKL042W YCR108CQ3E819 63 aa0.45□□□□□ -2.34
SPC42YKL042W SEN1Q00416 2231 aaKnown RBP0.44□□□□□ -2.34
SPC42YKL042W YDR119W-AQ2V2P9 66 aa0.43□□□□□ -2.34
SPC42YKL042W YGR121W-AQ3E816 71 aa0.42□□□□□ -2.34
SPC42YKL042W SIN3P22579 1536 aa0.42□□□□□ -2.34
SPC42YKL042W PMD1P32634 1753 aa0.42□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms