RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W YPL257WQ08974 193 aa2.56□□□□□ -2
BCD1YHR040W YBL008W-AQ3E821 79 aa2.56□□□□□ -2
BCD1YHR040W YOL085CQ99345 113 aa2.56□□□□□ -2
BCD1YHR040W ATP15P21306 62 aa2.55□□□□□ -2
BCD1YHR040W EDC2P40023 145 aaPredicted RBP2.55□□□□□ -2
BCD1YHR040W YGL034CP53186 121 aa2.55□□□□□ -2
BCD1YHR040W YDR274CP87283 123 aa2.55□□□□□ -2
BCD1YHR040W LSM6Q06406 86 aaKnown RBP2.55□□□□□ -2
BCD1YHR040W UBC5P15732 148 aa2.54□□□□□ -2
BCD1YHR040W YBR209WP38311 105 aa2.54□□□□□ -2
BCD1YHR040W SHU1P38751 150 aa2.54□□□□□ -2
BCD1YHR040W YHR130CP38834 111 aa2.54□□□□□ -2
BCD1YHR040W ARC15P40518 154 aaRIP-Chip data2.54□□□□□ -2not detected
BCD1YHR040W YIL059CP40520 121 aa2.54□□□□□ -2
BCD1YHR040W IGD1P43598 195 aa2.54□□□□□ -2
BCD1YHR040W FIP1P45976 327 aa2.54□□□□□ -2
BCD1YHR040W YGR025WP53216 100 aa2.54□□□□□ -2
BCD1YHR040W YNL184CP53876 108 aa2.54□□□□□ -2
BCD1YHR040W COX12Q01519 83 aa2.54□□□□□ -2
BCD1YHR040W YMR122W-AQ3E842 84 aa2.54□□□□□ -2
BCD1YHR040W TAR1Q8TGM6 124 aa2.54□□□□□ -2
BCD1YHR040W ENV10Q99382 181 aa2.54□□□□□ -2
BCD1YHR040W ADH1P00330 348 aaKnown RBP2.53□□□□□ -2
BCD1YHR040W RPS28BP0C0X0 67 aaKnown RBP2.53□□□□□ -2
BCD1YHR040W NRG2P38082 220 aa2.53□□□□□ -2
BCD1YHR040W YEL008WP40001 126 aa2.53□□□□□ -2
BCD1YHR040W YNL198CP40166 100 aa2.53□□□□□ -2
BCD1YHR040W SGF11Q03067 99 aa2.53□□□□□ -2
BCD1YHR040W VAM10Q08474 114 aa2.53□□□□□ -2
BCD1YHR040W RPS28AQ3E7X9 67 aaPredicted RBP2.53□□□□□ -2
BCD1YHR040W DYN1P36022 4092 aa2.52□□□□□ -2.01
BCD1YHR040W YHR139C-AO13536 103 aa2.52□□□□□ -2.01
BCD1YHR040W YCR085WP25650 117 aa2.52□□□□□ -2.01
BCD1YHR040W UGX2P32772 223 aa2.52□□□□□ -2.01
BCD1YHR040W KRE9P39005 276 aa2.52□□□□□ -2.01
BCD1YHR040W CIN5P40917 295 aa2.52□□□□□ -2.01
BCD1YHR040W YNR077CP53758 84 aa2.52□□□□□ -2.01
BCD1YHR040W RUB1Q03919 77 aa2.52□□□□□ -2.01
BCD1YHR040W HPA2Q06592 156 aa2.52□□□□□ -2.01
BCD1YHR040W YMR175W-AQ3E766 64 aa2.52□□□□□ -2.01
BCD1YHR040W SLO1Q3E784 85 aa2.52□□□□□ -2.01
BCD1YHR040W YOR020W-AQ3E824 90 aa2.52□□□□□ -2.01
BCD1YHR040W COX10P21592 462 aa2.51□□□□□ -2.01
BCD1YHR040W SMP1P38128 452 aa2.51□□□□□ -2.01
BCD1YHR040W ATX1P38636 73 aa2.51□□□□□ -2.01
BCD1YHR040W SPC1P46965 94 aa2.51□□□□□ -2.01
BCD1YHR040W ECM19Q06011 112 aa2.51□□□□□ -2.01
BCD1YHR040W YDL241WQ07738 123 aa2.51□□□□□ -2.01
BCD1YHR040W YEL067CP39978 195 aa2.5□□□□□ -2.01
BCD1YHR040W CWP2P43497 92 aa2.5□□□□□ -2.01
BCD1YHR040W YFR035CP43608 114 aa2.5□□□□□ -2.01
BCD1YHR040W YGL088WP53151 121 aa2.5□□□□□ -2.01
BCD1YHR040W YDL022C-AP0C5L6 82 aa2.49□□□□□ -2.01
BCD1YHR040W YCR001WP25347 104 aa2.49□□□□□ -2.01
BCD1YHR040W MRPL24P36525 258 aaPredicted RBP2.49□□□□□ -2.01
BCD1YHR040W MRPS12P53732 153 aa2.49□□□□□ -2.01
BCD1YHR040W RGM1Q00453 211 aa2.49□□□□□ -2.01
BCD1YHR040W YMR295CQ03559 197 aa2.49□□□□□ -2.01
BCD1YHR040W VTC1P40046 129 aaRIP-Chip data2.48□□□□□ -2.01not detected
BCD1YHR040W HUR1P45820 110 aa2.48□□□□□ -2.01
BCD1YHR040W SHH4Q06236 168 aa2.48□□□□□ -2.01
BCD1YHR040W RDS3Q06835 107 aaPredicted RBP2.48□□□□□ -2.01
BCD1YHR040W YBL112CQ3E7Y4 105 aa2.48□□□□□ -2.01
BCD1YHR040W YAL067W-AQ8TGK6 75 aa2.48□□□□□ -2.01
BCD1YHR040W URA2P07259 2214 aaKnown RBP2.48□□□□□ -2.01
BCD1YHR040W RPL26AP05743 127 aaKnown RBP2.47□□□□□ -2.01
BCD1YHR040W YBL081WP38180 368 aaKnown RBP2.47□□□□□ -2.01
BCD1YHR040W RPC10P40422 70 aa2.47□□□□□ -2.01
BCD1YHR040W OST2P46964 130 aa2.47□□□□□ -2.01
BCD1YHR040W RPL26BP53221 127 aaKnown RBP2.47□□□□□ -2.01
BCD1YHR040W ISD11Q6Q560 94 aa2.47□□□□□ -2.01
BCD1YHR040W BPH1P25356 2167 aa2.47□□□□□ -2.01
BCD1YHR040W RPL33AP05744 107 aaKnown RBP2.46□□□□□ -2.02
BCD1YHR040W RPL29P05747 59 aaPredicted RBP2.46□□□□□ -2.02
BCD1YHR040W MSA2P36157 363 aa2.46□□□□□ -2.02
BCD1YHR040W RPL33BP41056 107 aaKnown RBP2.46□□□□□ -2.02
BCD1YHR040W YNL190WP53872 204 aa2.46□□□□□ -2.02
BCD1YHR040W HAL1Q01766 294 aa2.46□□□□□ -2.02
BCD1YHR040W YMR230W-AQ3E7B5 62 aa2.46□□□□□ -2.02
BCD1YHR040W TDA8Q6B2U8 126 aa2.46□□□□□ -2.02
BCD1YHR040W YAL065CO13511 128 aa2.45□□□□□ -2.02
BCD1YHR040W RTC6O14464 93 aa2.45□□□□□ -2.02
BCD1YHR040W AQY2P0CD90 149 aa2.45□□□□□ -2.02
BCD1YHR040W RPA12P32529 125 aaKnown RBP2.45□□□□□ -2.02
BCD1YHR040W MID2P36027 376 aa2.45□□□□□ -2.02
BCD1YHR040W AIM19P40502 157 aa2.45□□□□□ -2.02
BCD1YHR040W SKI6P46948 246 aaPredicted RBP2.45□□□□□ -2.02
BCD1YHR040W SMD1Q02260 146 aaPredicted RBP2.45□□□□□ -2.02
BCD1YHR040W YLL006W-AQ3E814 58 aa2.45□□□□□ -2.02
BCD1YHR040W YBL039W-BP0C268 59 aa2.44□□□□□ -2.02
BCD1YHR040W INO4P13902 151 aa2.44□□□□□ -2.02
BCD1YHR040W YBR219CP38317 127 aa2.44□□□□□ -2.02
BCD1YHR040W SVP26P38869 228 aa2.44□□□□□ -2.02
BCD1YHR040W MVB12P42939 101 aa2.44□□□□□ -2.02
BCD1YHR040W YFL019CP43576 117 aa2.44□□□□□ -2.02
BCD1YHR040W SFT1P43682 97 aa2.44□□□□□ -2.02
BCD1YHR040W KNH1P50112 268 aa2.44□□□□□ -2.02
BCD1YHR040W ICY1Q04329 127 aa2.44□□□□□ -2.02
BCD1YHR040W YMR320WQ04897 101 aa2.44□□□□□ -2.02
BCD1YHR040W YGL041C-BQ3E750 60 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms