RNA–Protein interactions for RNA: YFL049W

SWP82, Transcript of Member of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWP82, Length 1,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWP82YFL049W TEL1P38110 2787 aa2.74□□□□□ -1.97
SWP82YFL049W CSF1Q12150 2958 aa2.74□□□□□ -1.97
SWP82YFL049W LSM2P38203 95 aaKnown RBP2.73□□□□□ -1.97
SWP82YFL049W YLR194CQ05777 254 aa2.73□□□□□ -1.97
SWP82YFL049W PCC1Q3E833 88 aa2.73□□□□□ -1.97
SWP82YFL049W CDC39P25655 2108 aaKnown RBP2.73□□□□□ -1.97
SWP82YFL049W SOD1P00445 154 aaKnown RBP2.73□□□□□ -1.97
SWP82YFL049W PAU16P35994 123 aa2.73□□□□□ -1.97
SWP82YFL049W COX23P38824 151 aa2.73□□□□□ -1.97
SWP82YFL049W PAU15P40585 124 aa2.73□□□□□ -1.97
SWP82YFL049W VMA21P41806 77 aa2.73□□□□□ -1.97
SWP82YFL049W YFL065CP43539 102 aa2.73□□□□□ -1.97
SWP82YFL049W YPR203WQ08994 102 aa2.73□□□□□ -1.97
SWP82YFL049W YMR175W-AQ3E766 64 aa2.73□□□□□ -1.97
SWP82YFL049W YCL042WP25572 119 aa2.72□□□□□ -1.97
SWP82YFL049W ATG8P38182 117 aaRIP-Chip data2.72□□□□□ -1.97not detected
SWP82YFL049W SVP26P38869 228 aa2.72□□□□□ -1.97
SWP82YFL049W SNN1P48232 102 aa2.72□□□□□ -1.97
SWP82YFL049W YJL197C-AP0C5P0 93 aa2.71□□□□□ -1.98
SWP82YFL049W YCR085WP25650 117 aa2.71□□□□□ -1.98
SWP82YFL049W NRG2P38082 220 aa2.71□□□□□ -1.98
SWP82YFL049W YBR013CP38215 129 aa2.71□□□□□ -1.98
SWP82YFL049W YHR138CP38841 114 aaPredicted RBP2.71□□□□□ -1.98
SWP82YFL049W SED1Q01589 338 aa2.71□□□□□ -1.98
SWP82YFL049W YHR213W-AQ8TGT4 77 aa2.71□□□□□ -1.98
SWP82YFL049W AGA2P32781 87 aa2.71□□□□□ -1.98
SWP82YFL049W DAN1P47178 298 aa2.71□□□□□ -1.98
SWP82YFL049W RGM1Q00453 211 aa2.71□□□□□ -1.98
SWP82YFL049W QCR8P08525 94 aa2.7□□□□□ -1.98
SWP82YFL049W RPB7P34087 171 aa2.7□□□□□ -1.98
SWP82YFL049W PAU5P43575 122 aa2.7□□□□□ -1.98
SWP82YFL049W YJL144WP47009 104 aa2.7□□□□□ -1.98
SWP82YFL049W YDR114CQ04597 100 aa2.7□□□□□ -1.98
SWP82YFL049W EMC6Q12431 108 aa2.7□□□□□ -1.98
SWP82YFL049W SUS1Q6WNK7 96 aa2.7□□□□□ -1.98
SWP82YFL049W IRA1P18963 3092 aa2.7□□□□□ -1.98
SWP82YFL049W YHR022CP38763 256 aa2.69□□□□□ -1.98
SWP82YFL049W CYT2Q00873 224 aa2.69□□□□□ -1.98
SWP82YFL049W MRPS9P38120 278 aa2.69□□□□□ -1.98
SWP82YFL049W ICY1Q04329 127 aa2.69□□□□□ -1.98
SWP82YFL049W YLR363W-AQ3E747 85 aa2.69□□□□□ -1.98
SWP82YFL049W Q0297Q9ZZV8 51 aa2.69□□□□□ -1.98
SWP82YFL049W RPL39P04650 51 aa2.68□□□□□ -1.98
SWP82YFL049W GCV3P39726 170 aaPredicted RBP2.68□□□□□ -1.98
SWP82YFL049W RPL36BO14455 100 aaKnown RBP2.67□□□□□ -1.98
SWP82YFL049W RPL36AP05745 100 aaPredicted RBP2.67□□□□□ -1.98
SWP82YFL049W PRM3Q08931 133 aa2.67□□□□□ -1.98
SWP82YFL049W RPS22AP0C0W1 130 aaKnown RBP2.66□□□□□ -1.98
SWP82YFL049W RPA12P32529 125 aaKnown RBP2.66□□□□□ -1.98
SWP82YFL049W YBR027CP38220 110 aa2.66□□□□□ -1.98
SWP82YFL049W YCL048W-AQ2V2Q2 79 aa2.66□□□□□ -1.98
SWP82YFL049W RSM18P40033 138 aa2.65□□□□□ -1.98
SWP82YFL049W ENV10Q99382 181 aa2.65□□□□□ -1.98
SWP82YFL049W YHL005CP38752 130 aa2.65□□□□□ -1.99
SWP82YFL049W IMP2P46972 177 aa2.65□□□□□ -1.99
SWP82YFL049W YMR105W-AQ8TGS8 64 aa2.65□□□□□ -1.99
SWP82YFL049W HMRA2P0CY13 119 aa2.64□□□□□ -1.99
SWP82YFL049W ICS3P47034 131 aa2.64□□□□□ -1.99
SWP82YFL049W HPA2Q06592 156 aa2.63□□□□□ -1.99
SWP82YFL049W ROX3P25046 220 aa2.62□□□□□ -1.99
SWP82YFL049W AIM4P38305 123 aaPredicted RBP2.62□□□□□ -1.99
SWP82YFL049W POR2P40478 281 aa2.62□□□□□ -1.99
SWP82YFL049W YOR192C-CQ3E736 78 aa2.62□□□□□ -1.99
SWP82YFL049W YLR285C-AQ3E771 56 aa2.62□□□□□ -1.99
SWP82YFL049W GCN1P33892 2672 aaKnown RBP2.62□□□□□ -1.99
SWP82YFL049W PRP8P33334 2413 aaKnown RBP2.62□□□□□ -1.99
SWP82YFL049W YGL014C-AP0C5N1 53 aa2.62□□□□□ -1.99
SWP82YFL049W YDR119W-AQ2V2P9 66 aa2.62□□□□□ -1.99
SWP82YFL049W YPR108W-AQ3E7B3 70 aa2.62□□□□□ -1.99
SWP82YFL049W TAR1Q8TGM6 124 aa2.62□□□□□ -1.99
SWP82YFL049W BLM10P43583 2143 aa2.62□□□□□ -1.99
SWP82YFL049W CCW14O13547 238 aa2.61□□□□□ -1.99
SWP82YFL049W PAI3P01094 68 aa2.61□□□□□ -1.99
SWP82YFL049W RPS22BQ3E7Y3 130 aaKnown RBP2.61□□□□□ -1.99
SWP82YFL049W NUM1Q00402 2748 aa2.61□□□□□ -1.99
SWP82YFL049W YEL008WP40001 126 aa2.6□□□□□ -1.99
SWP82YFL049W LST8P41318 303 aa2.6□□□□□ -1.99
SWP82YFL049W YHR007C-AQ07074 71 aa2.6□□□□□ -1.99
SWP82YFL049W YOL118CQ08259 102 aa2.6□□□□□ -1.99
SWP82YFL049W MRP17P28778 131 aa2.6□□□□□ -1.99
SWP82YFL049W GIS2P53849 153 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SWP82YFL049W YPR145C-AQ2V2P0 78 aa2.6□□□□□ -1.99
SWP82YFL049W HUG1Q6Q5K6 68 aa2.6□□□□□ -1.99
SWP82YFL049W MIX17Q03667 156 aa2.59□□□□□ -1.99
SWP82YFL049W SEC16P48415 2195 aaKnown RBP2.59□□□□□ -2
SWP82YFL049W MEC1P38111 2368 aa2.58□□□□□ -2
SWP82YFL049W NHP2P32495 156 aaPredicted RBP2.58□□□□□ -2
SWP82YFL049W TRA1P38811 3744 aa2.58□□□□□ -2
SWP82YFL049W TOM6P33448 61 aa2.58□□□□□ -2
SWP82YFL049W MRPL38P35996 138 aaPredicted RBP2.57□□□□□ -2
SWP82YFL049W DSE2P38844 325 aa2.57□□□□□ -2
SWP82YFL049W LSM6Q06406 86 aaKnown RBP2.56□□□□□ -2
SWP82YFL049W SPC1P46965 94 aa2.56□□□□□ -2
SWP82YFL049W YMR122CQ03879 124 aa2.56□□□□□ -2
SWP82YFL049W SWM2P40342 146 aa2.55□□□□□ -2
SWP82YFL049W YIL163CP40448 117 aa2.55□□□□□ -2
SWP82YFL049W YLR146W-AQ2V2P1 62 aa2.55□□□□□ -2
SWP82YFL049W YGL258W-AQ3E740 77 aa2.55□□□□□ -2
SWP82YFL049W YCR095W-AQ3E787 52 aa2.55□□□□□ -2
SWP82YFL049W RPL33AP05744 107 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 74 ms