RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W MPC3P53311 146 aa0.74□□□□□ -2.29
SMC1YFL008W YHP1Q04116 353 aa0.74□□□□□ -2.29
SMC1YFL008W NIP7Q08962 181 aaKnown RBP0.74□□□□□ -2.29
SMC1YFL008W GRE1Q08969 168 aa0.74□□□□□ -2.29
SMC1YFL008W ROX3P25046 220 aa0.73□□□□□ -2.29
SMC1YFL008W CSH1P38287 376 aa0.73□□□□□ -2.29
SMC1YFL008W SPI1P40092 148 aa0.73□□□□□ -2.29
SMC1YFL008W DAD4P69851 72 aa0.73□□□□□ -2.29
SMC1YFL008W IRC21Q04772 201 aa0.73□□□□□ -2.29
SMC1YFL008W YPR064WQ12492 139 aa0.73□□□□□ -2.29
SMC1YFL008W YKL018C-AQ3E7A7 99 aa0.73□□□□□ -2.29
SMC1YFL008W MRPL31P14063 131 aaPredicted RBP0.73□□□□□ -2.29
SMC1YFL008W SPT4P32914 102 aaPredicted RBP0.73□□□□□ -2.29
SMC1YFL008W PAM17P36147 197 aa0.73□□□□□ -2.29
SMC1YFL008W YBL071CP38185 102 aa0.73□□□□□ -2.29
SMC1YFL008W YER187WP40102 141 aa0.73□□□□□ -2.29
SMC1YFL008W CIS3P47001 227 aa0.73□□□□□ -2.29
SMC1YFL008W ALG13P53178 202 aa0.73□□□□□ -2.29
SMC1YFL008W SNA2P56508 79 aa0.73□□□□□ -2.29
SMC1YFL008W YMR007WQ03675 126 aa0.73□□□□□ -2.29
SMC1YFL008W TIM22Q12328 207 aa0.73□□□□□ -2.29
SMC1YFL008W YDR119W-AQ2V2P9 66 aa0.73□□□□□ -2.29
SMC1YFL008W RPL36BO14455 100 aaKnown RBP0.73□□□□□ -2.29
SMC1YFL008W RPL36AP05745 100 aaPredicted RBP0.73□□□□□ -2.29
SMC1YFL008W IMP1P28627 190 aa0.73□□□□□ -2.29
SMC1YFL008W LST8P41318 303 aa0.73□□□□□ -2.29
SMC1YFL008W SPC1P46965 94 aa0.73□□□□□ -2.29
SMC1YFL008W HSK3P69852 69 aa0.73□□□□□ -2.29
SMC1YFL008W SPG4Q04438 115 aa0.73□□□□□ -2.29
SMC1YFL008W PBP4Q07362 185 aaKnown RBP0.73□□□□□ -2.29
SMC1YFL008W KSH1Q8TGJ3 72 aa0.73□□□□□ -2.29
SMC1YFL008W OST5Q92316 86 aa0.73□□□□□ -2.29
SMC1YFL008W FAS1P07149 2051 aaKnown RBP0.72□□□□□ -2.29
SMC1YFL008W YHR214C-DP0CX93 97 aa0.72□□□□□ -2.29
SMC1YFL008W DSE2P38844 325 aa0.72□□□□□ -2.29
SMC1YFL008W YGR269WP40326 108 aa0.72□□□□□ -2.29
SMC1YFL008W NCE101Q02820 53 aa0.72□□□□□ -2.29
SMC1YFL008W MGR2Q02889 113 aa0.72□□□□□ -2.29
SMC1YFL008W FIT2Q08906 153 aa0.72□□□□□ -2.29
SMC1YFL008W YLR285C-AQ3E771 56 aa0.72□□□□□ -2.29
SMC1YFL008W HUG1Q6Q5K6 68 aa0.72□□□□□ -2.29
SMC1YFL008W YOR032W-AQ8TGS1 66 aa0.72□□□□□ -2.29
SMC1YFL008W YIL163CP40448 117 aa0.72□□□□□ -2.29
SMC1YFL008W BRP1P53194 125 aa0.72□□□□□ -2.29
SMC1YFL008W YIL014C-AQ02598 104 aa0.72□□□□□ -2.29
SMC1YFL008W MIX17Q03667 156 aa0.72□□□□□ -2.29
SMC1YFL008W ICY1Q04329 127 aa0.72□□□□□ -2.29
SMC1YFL008W ATP20Q12233 115 aa0.72□□□□□ -2.29
SMC1YFL008W COA2Q3E823 68 aa0.72□□□□□ -2.29
SMC1YFL008W YHR214C-EQ8TGK0 99 aa0.72□□□□□ -2.29
SMC1YFL008W YPR010C-AA5Z2X5 72 aa0.71□□□□□ -2.3
SMC1YFL008W YJR107C-AP0CT86 78 aa0.71□□□□□ -2.3
SMC1YFL008W FYV5P25585 152 aa0.71□□□□□ -2.3
SMC1YFL008W HSP150P32478 413 aa0.71□□□□□ -2.3
SMC1YFL008W SWT21P53873 357 aaPredicted RBP0.71□□□□□ -2.3
SMC1YFL008W ERI1P62651 68 aaKnown RBP0.71□□□□□ -2.3
SMC1YFL008W YOR381W-AQ3E804 55 aa0.71□□□□□ -2.3
SMC1YFL008W YAL065CO13511 128 aa0.71□□□□□ -2.3
SMC1YFL008W YSF3P0C074 85 aaPredicted RBP0.71□□□□□ -2.3
SMC1YFL008W YIR020CP40575 100 aa0.71□□□□□ -2.3
SMC1YFL008W YGR219WP53307 113 aa0.71□□□□□ -2.3
SMC1YFL008W PMP3P87284 55 aa0.71□□□□□ -2.3
SMC1YFL008W SHU1P38751 150 aa0.71□□□□□ -2.3
SMC1YFL008W IRC23Q08416 157 aa0.71□□□□□ -2.3
SMC1YFL008W CCW12Q12127 133 aa0.71□□□□□ -2.3
SMC1YFL008W SDH6Q3E785 79 aa0.71□□□□□ -2.3
SMC1YFL008W YCR095W-AQ3E787 52 aa0.71□□□□□ -2.3
SMC1YFL008W YML100W-AQ8TGT0 57 aa0.71□□□□□ -2.3
SMC1YFL008W SRX1P36077 127 aa0.7□□□□□ -2.3
SMC1YFL008W YER135CP40082 130 aa0.7□□□□□ -2.3
SMC1YFL008W POR2P40478 281 aa0.7□□□□□ -2.3
SMC1YFL008W IMP2P46972 177 aa0.7□□□□□ -2.3
SMC1YFL008W TOS8P53147 276 aa0.7□□□□□ -2.3
SMC1YFL008W BSC4P53841 131 aa0.7□□□□□ -2.3
SMC1YFL008W ATP18P81450 59 aa0.7□□□□□ -2.3
SMC1YFL008W YOL097W-AQ3E7Y9 61 aa0.7□□□□□ -2.3
SMC1YFL008W YLR307C-AQ3E825 87 aa0.7□□□□□ -2.3
SMC1YFL008W MIC10Q96VH5 97 aa0.7□□□□□ -2.3
SMC1YFL008W YLR236CA0A023PZG4 107 aa0.7□□□□□ -2.3
SMC1YFL008W ARC15P40518 154 aaRIP-Chip data0.7□□□□□ -2.3not detected
SMC1YFL008W ICS3P47034 131 aa0.7□□□□□ -2.3
SMC1YFL008W YJL027CP47063 138 aaPredicted RBP0.7□□□□□ -2.3
SMC1YFL008W YGL193CP53097 103 aa0.7□□□□□ -2.3
SMC1YFL008W RGM1Q00453 211 aa0.7□□□□□ -2.3
SMC1YFL008W YDL241WQ07738 123 aa0.7□□□□□ -2.3
SMC1YFL008W YCL048W-AQ2V2Q2 79 aa0.7□□□□□ -2.3
SMC1YFL008W YDL022C-AP0C5L6 82 aa0.7□□□□□ -2.3
SMC1YFL008W DDR48P18899 430 aaKnown RBP0.7□□□□□ -2.3
SMC1YFL008W YKR032WP36127 104 aa0.7□□□□□ -2.3
SMC1YFL008W YKR045CP36138 183 aa0.7□□□□□ -2.3
SMC1YFL008W QCR10P37299 77 aa0.7□□□□□ -2.3
SMC1YFL008W YHL037CP38733 133 aa0.7□□□□□ -2.3
SMC1YFL008W YGL149WP53116 101 aa0.7□□□□□ -2.3
SMC1YFL008W LIP1Q03579 150 aa0.7□□□□□ -2.3
SMC1YFL008W YDR114CQ04597 100 aa0.7□□□□□ -2.3
SMC1YFL008W YLR156WP0CE96 114 aa0.69□□□□□ -2.3
SMC1YFL008W YLR159WP0CE97 114 aa0.69□□□□□ -2.3
SMC1YFL008W YLR161WP0CE98 114 aa0.69□□□□□ -2.3
SMC1YFL008W YCR001WP25347 104 aa0.69□□□□□ -2.3
SMC1YFL008W VTC1P40046 129 aaRIP-Chip data0.69□□□□□ -2.3not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms