RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC7	YDL017W	PPT2	Q12036	173 aa		5.12	□□□□□ -1.59
CDC7	YDL017W	RDS3	Q06835	107 aa	Predicted RBP	5.11	□□□□□ -1.59
CDC7	YDL017W	TOA2	P32774	122 aa		5.1	□□□□□ -1.59
CDC7	YDL017W	CWP2	P43497	92 aa		5.1	□□□□□ -1.59
CDC7	YDL017W	ARO2	P28777	376 aa	Known RBP	5.09	□□□□□ -1.59
CDC7	YDL017W	YHR130C	P38834	111 aa		5.09	□□□□□ -1.59
CDC7	YDL017W	ERG28	P40030	148 aa		5.09	□□□□□ -1.59
CDC7	YDL017W	RPR2	P40571	144 aa		5.09	□□□□□ -1.59
CDC7	YDL017W	ENV10	Q99382	181 aa		5.09	□□□□□ -1.59
CDC7	YDL017W	YIA6	P40556	373 aa		5.08	□□□□□ -1.6
CDC7	YDL017W	RUB1	Q03919	77 aa		5.08	□□□□□ -1.6
CDC7	YDL017W	YAL065C	O13511	128 aa		5.07	□□□□□ -1.6
CDC7	YDL017W	UBC11	P52492	156 aa		5.07	□□□□□ -1.6
CDC7	YDL017W	RGM1	Q00453	211 aa		5.07	□□□□□ -1.6
CDC7	YDL017W	YMR175W-A	Q3E766	64 aa		5.07	□□□□□ -1.6
CDC7	YDL017W	HAL1	Q01766	294 aa		5.06	□□□□□ -1.6
CDC7	YDL017W	YMR320W	Q04897	101 aa		5.06	□□□□□ -1.6
CDC7	YDL017W	HPA2	Q06592	156 aa		5.06	□□□□□ -1.6
CDC7	YDL017W	YLR122C	Q12312	125 aa		5.06	□□□□□ -1.6
CDC7	YDL017W	YPR010C-A	A5Z2X5	72 aa		5.05	□□□□□ -1.6
CDC7	YDL017W	RPL33A	P05744	107 aa	Known RBP	5.05	□□□□□ -1.6
CDC7	YDL017W	RPC10	P40422	70 aa		5.05	□□□□□ -1.6
CDC7	YDL017W	RPL33B	P41056	107 aa	Known RBP	5.05	□□□□□ -1.6
CDC7	YDL017W	YPL257W	Q08974	193 aa		5.05	□□□□□ -1.6
CDC7	YDL017W	SLO1	Q3E784	85 aa		5.05	□□□□□ -1.6
CDC7	YDL017W	YLL006W-A	Q3E814	58 aa		5.05	□□□□□ -1.6
CDC7	YDL017W	DYN1	P36022	4092 aa		5.05	□□□□□ -1.6
CDC7	YDL017W	COX10	P21592	462 aa		5.04	□□□□□ -1.6
CDC7	YDL017W	YOR020W-A	Q3E824	90 aa		5.04	□□□□□ -1.6
CDC7	YDL017W	AUA1	P32450	94 aa		5.03	□□□□□ -1.6
CDC7	YDL017W	SPC1	P46965	94 aa		5.03	□□□□□ -1.6
CDC7	YDL017W	YDL241W	Q07738	123 aa		5.03	□□□□□ -1.6
CDC7	YDL017W	OST2	P46964	130 aa		5.02	□□□□□ -1.61
CDC7	YDL017W	YLL066W-B	Q8TGJ7	56 aa		5.02	□□□□□ -1.61
CDC7	YDL017W	RPA12	P32529	125 aa	Known RBP	5.02	□□□□□ -1.61
CDC7	YDL017W	MRPL24	P36525	258 aa	Predicted RBP	5.02	□□□□□ -1.61
CDC7	YDL017W	HUR1	P45820	110 aa		5.02	□□□□□ -1.61
CDC7	YDL017W	YDR115W	Q04598	105 aa		5.02	□□□□□ -1.61
CDC7	YDL017W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
CDC7	YDL017W	YBL081W	P38180	368 aa	Known RBP	5.01	□□□□□ -1.61
CDC7	YDL017W	ATX1	P38636	73 aa		5.01	□□□□□ -1.61
CDC7	YDL017W	DSE2	P38844	325 aa		5.01	□□□□□ -1.61
CDC7	YDL017W	DIF1	O13577	133 aa		5	□□□□□ -1.61
CDC7	YDL017W	SVP26	P38869	228 aa		4.99	□□□□□ -1.61
CDC7	YDL017W	YAL064W	P39711	94 aa		4.99	□□□□□ -1.61
CDC7	YDL017W	YPL229W	Q99395	206 aa		4.99	□□□□□ -1.61
CDC7	YDL017W	RPL29	P05747	59 aa	Predicted RBP	4.98	□□□□□ -1.61
CDC7	YDL017W	ABF2	Q02486	183 aa		4.98	□□□□□ -1.61
CDC7	YDL017W	PBA1	Q05778	276 aa		4.98	□□□□□ -1.61
CDC7	YDL017W	YOR034C-A	Q3E735	80 aa		4.98	□□□□□ -1.61
CDC7	YDL017W	AIM19	P40502	157 aa		4.97	□□□□□ -1.61
CDC7	YDL017W	MVB12	P42939	101 aa		4.97	□□□□□ -1.61
CDC7	YDL017W	KNH1	P50112	268 aa		4.97	□□□□□ -1.61
CDC7	YDL017W	IRC21	Q04772	201 aa		4.97	□□□□□ -1.61
CDC7	YDL017W	YLR236C	A0A023PZG4	107 aa		4.97	□□□□□ -1.61
CDC7	YDL017W	RTC6	O14464	93 aa		4.97	□□□□□ -1.61
CDC7	YDL017W	AQY2	P0CD90	149 aa		4.96	□□□□□ -1.62
CDC7	YDL017W	INO4	P13902	151 aa		4.96	□□□□□ -1.62
CDC7	YDL017W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
CDC7	YDL017W	MSA2	P36157	363 aa		4.96	□□□□□ -1.62
CDC7	YDL017W	SMD1	Q02260	146 aa	Predicted RBP	4.96	□□□□□ -1.62
CDC7	YDL017W	ICY1	Q04329	127 aa		4.95	□□□□□ -1.62
CDC7	YDL017W	RRT15	Q3E811	62 aa		4.95	□□□□□ -1.62
CDC7	YDL017W	YFL019C	P43576	117 aa		4.94	□□□□□ -1.62
CDC7	YDL017W	YBL039W-B	P0C268	59 aa		4.93	□□□□□ -1.62
CDC7	YDL017W	YCR085W	P25650	117 aa		4.93	□□□□□ -1.62
CDC7	YDL017W	RPL11A	P0C0W9	174 aa	Known RBP	4.92	□□□□□ -1.62
CDC7	YDL017W	RPL11B	Q3E757	174 aa	Predicted RBP	4.92	□□□□□ -1.62
CDC7	YDL017W	YNL162W-A	Q3E7A8	72 aa		4.92	□□□□□ -1.62
CDC7	YDL017W	ISD11	Q6Q560	94 aa		4.92	□□□□□ -1.62
CDC7	YDL017W	YDR381C-A	Q3E6R5	114 aa		4.91	□□□□□ -1.62
CDC7	YDL017W	PBI2	P0CT04	75 aa	Known RBP	4.9	□□□□□ -1.63
CDC7	YDL017W	UBC4	P15731	148 aa		4.9	□□□□□ -1.63
CDC7	YDL017W	MPC3	P53311	146 aa		4.9	□□□□□ -1.63
CDC7	YDL017W	YAR023C	D6VPM8	179 aa		4.89	□□□□□ -1.63
CDC7	YDL017W	YJR107C-A	P0CT86	78 aa		4.89	□□□□□ -1.63
CDC7	YDL017W	YFL065C	P43539	102 aa		4.89	□□□□□ -1.63
CDC7	YDL017W	IGD1	P43598	195 aa		4.89	□□□□□ -1.63
CDC7	YDL017W	SKI6	P46948	246 aa	Predicted RBP	4.89	□□□□□ -1.63
CDC7	YDL017W	YPR203W	Q08994	102 aa		4.89	□□□□□ -1.63
CDC7	YDL017W	YAL063C-A	Q3E791	96 aa		4.89	□□□□□ -1.63
CDC7	YDL017W	RPL26A	P05743	127 aa	Known RBP	4.87	□□□□□ -1.63
CDC7	YDL017W	RPL26B	P53221	127 aa	Known RBP	4.87	□□□□□ -1.63
CDC7	YDL017W	SNA2	P56508	79 aa		4.87	□□□□□ -1.63
CDC7	YDL017W	YLR307C-A	Q3E825	87 aa		4.87	□□□□□ -1.63
CDC7	YDL017W	YFL041W-A	Q3E817	63 aa		4.86	□□□□□ -1.63
CDC7	YDL017W	KRE1	P17260	313 aa		4.85	□□□□□ -1.63
CDC7	YDL017W	SMP1	P38128	452 aa		4.85	□□□□□ -1.63
CDC7	YDL017W	YBR230W-A	Q3E762	66 aa		4.84	□□□□□ -1.63
CDC7	YDL017W	Q0032	Q9ZZX7	96 aa		4.84	□□□□□ -1.63
CDC7	YDL017W	FYV5	P25585	152 aa		4.83	□□□□□ -1.64
CDC7	YDL017W	GAT4	P40569	121 aa		4.83	□□□□□ -1.64
CDC7	YDL017W	ATP18	P81450	59 aa		4.83	□□□□□ -1.64
CDC7	YDL017W	YJL127C-B	Q3E828	52 aa		4.82	□□□□□ -1.64
CDC7	YDL017W	MDN1	Q12019	4910 aa	Known RBP	4.82	□□□□□ -1.64
CDC7	YDL017W	YHR139C-A	O13536	103 aa		4.82	□□□□□ -1.64
CDC7	YDL017W	YDR029W	Q12111	104 aa		4.82	□□□□□ -1.64
CDC7	YDL017W	YGL041C-B	Q3E750	60 aa		4.82	□□□□□ -1.64
CDC7	YDL017W	YNL042W-B	Q3E7Z2	85 aa		4.81	□□□□□ -1.64
CDC7	YDL017W	ECM12	O13529	151 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms