RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C YMR122W-AQ3E842 84 aa1.05□□□□□ -2.24
SHG1YBR258C KSH1Q8TGJ3 72 aa1.05□□□□□ -2.24
SHG1YBR258C PBI2P0CT04 75 aaKnown RBP1.04□□□□□ -2.24
SHG1YBR258C SPI1P40092 148 aa1.04□□□□□ -2.24
SHG1YBR258C SCS22Q6Q595 175 aa1.04□□□□□ -2.24
SHG1YBR258C FMP49A0A023PZB3 126 aa1.03□□□□□ -2.24
SHG1YBR258C MRPL24P36525 258 aaPredicted RBP1.03□□□□□ -2.24
SHG1YBR258C SCP1Q08873 200 aa1.03□□□□□ -2.24
SHG1YBR258C LSM2P38203 95 aaKnown RBP1.02□□□□□ -2.25
SHG1YBR258C VMA10P48836 114 aaKnown RBP1.02□□□□□ -2.25
SHG1YBR258C YGL193CP53097 103 aa1.02□□□□□ -2.25
SHG1YBR258C SEN15Q04675 128 aa1.02□□□□□ -2.25
SHG1YBR258C POC4Q12245 148 aaPredicted RBP1.02□□□□□ -2.25
SHG1YBR258C ECM12O13529 151 aa1.01□□□□□ -2.25
SHG1YBR258C YBR200W-AQ3E755 54 aa1.01□□□□□ -2.25
SHG1YBR258C RPS28BP0C0X0 67 aaKnown RBP1□□□□□ -2.25
SHG1YBR258C UBC5P15732 148 aa1□□□□□ -2.25
SHG1YBR258C HHY1P39982 102 aa1□□□□□ -2.25
SHG1YBR258C RPC10P40422 70 aa1□□□□□ -2.25
SHG1YBR258C ATP19P81451 68 aa1□□□□□ -2.25
SHG1YBR258C PMP3P87284 55 aa1□□□□□ -2.25
SHG1YBR258C YGL041C-BQ3E750 60 aa1□□□□□ -2.25
SHG1YBR258C RPS28AQ3E7X9 67 aaPredicted RBP1□□□□□ -2.25
SHG1YBR258C PET20Q99373 253 aa1□□□□□ -2.25
SHG1YBR258C SEC59P20048 519 aa0.99□□□□□ -2.25
SHG1YBR258C MIC27P50945 234 aa0.99□□□□□ -2.25
SHG1YBR258C YHR173CP38864 112 aa0.98□□□□□ -2.25
SHG1YBR258C YDR210WQ03482 75 aa0.98□□□□□ -2.25
SHG1YBR258C MRP17P28778 131 aa0.97□□□□□ -2.25
SHG1YBR258C MRP49P32388 137 aa0.97□□□□□ -2.25
SHG1YBR258C YIL163CP40448 117 aa0.97□□□□□ -2.25
SHG1YBR258C MOG1P47123 218 aa0.97□□□□□ -2.25
SHG1YBR258C YCL001W-AP87012 153 aa0.97□□□□□ -2.25
SHG1YBR258C YPR153WQ06537 140 aa0.97□□□□□ -2.25
SHG1YBR258C YKL068W-AQ3E826 78 aa0.97□□□□□ -2.25
SHG1YBR258C PCC1Q3E833 88 aa0.97□□□□□ -2.25
SHG1YBR258C HSP12P22943 109 aaKnown RBP0.96□□□□□ -2.26
SHG1YBR258C SWM2P40342 146 aa0.96□□□□□ -2.26
SHG1YBR258C YHR213W-BQ8TGK1 99 aa0.96□□□□□ -2.26
SHG1YBR258C NHP6AP11632 93 aaKnown RBP0.95□□□□□ -2.26
SHG1YBR258C IPI1P38803 334 aaPredicted RBP0.95□□□□□ -2.26
SHG1YBR258C PKR1Q03880 122 aaKnown RBP0.95□□□□□ -2.26
SHG1YBR258C SPC24Q04477 213 aa0.95□□□□□ -2.26
SHG1YBR258C YOR072WQ08486 104 aa0.95□□□□□ -2.26
SHG1YBR258C YOR385WQ08909 290 aa0.95□□□□□ -2.26
SHG1YBR258C YMR141CP40211 102 aa0.94□□□□□ -2.26
SHG1YBR258C CWP2P43497 92 aa0.94□□□□□ -2.26
SHG1YBR258C LSM1P47017 172 aaKnown RBP0.94□□□□□ -2.26
SHG1YBR258C YNL122CP53921 115 aaPredicted RBP0.94□□□□□ -2.26
SHG1YBR258C YMR090WQ04304 227 aaKnown RBP0.94□□□□□ -2.26
SHG1YBR258C YLR342W-AQ3E810 57 aa0.94□□□□□ -2.26
SHG1YBR258C ENV10Q99382 181 aa0.94□□□□□ -2.26
SHG1YBR258C RPS22AP0C0W1 130 aaKnown RBP0.93□□□□□ -2.26
SHG1YBR258C RPS22BQ3E7Y3 130 aaKnown RBP0.93□□□□□ -2.26
SHG1YBR258C COA2Q3E823 68 aa0.93□□□□□ -2.26
SHG1YBR258C YGL014C-AP0C5N1 53 aa0.92□□□□□ -2.26
SHG1YBR258C FYV5P25585 152 aa0.92□□□□□ -2.26
SHG1YBR258C SPG1P50088 95 aa0.92□□□□□ -2.26
SHG1YBR258C MGR2Q02889 113 aa0.92□□□□□ -2.26
SHG1YBR258C YLR118CQ12354 227 aa0.92□□□□□ -2.26
SHG1YBR258C YMR175W-AQ3E766 64 aa0.92□□□□□ -2.26
SHG1YBR258C DAD1Q12248 94 aa0.91□□□□□ -2.26
SHG1YBR258C MED11Q99278 115 aa0.91□□□□□ -2.26
SHG1YBR258C Q0032Q9ZZX7 96 aa0.91□□□□□ -2.26
SHG1YBR258C YGR121W-AQ3E816 71 aa0.9□□□□□ -2.27
SHG1YBR258C YHR213W-AQ8TGT4 77 aa0.9□□□□□ -2.27
SHG1YBR258C Q0017Q9ZZX8 53 aa0.9□□□□□ -2.27
SHG1YBR258C MRPL31P14063 131 aaPredicted RBP0.89□□□□□ -2.27
SHG1YBR258C YHR140WP38842 239 aa0.89□□□□□ -2.27
SHG1YBR258C IRC21Q04772 201 aa0.89□□□□□ -2.27
SHG1YBR258C YAL065CO13511 128 aa0.88□□□□□ -2.27
SHG1YBR258C YER039C-AP0CD97 72 aa0.88□□□□□ -2.27
SHG1YBR258C QCR9P22289 66 aa0.88□□□□□ -2.27
SHG1YBR258C YMR122CQ03879 124 aa0.88□□□□□ -2.27
SHG1YBR258C YMR082CQ04276 118 aa0.88□□□□□ -2.27
SHG1YBR258C SOM1Q05676 74 aa0.88□□□□□ -2.27
SHG1YBR258C PAU19P0CE85 124 aa0.87□□□□□ -2.27
SHG1YBR258C PAU21P0CE86 164 aa0.87□□□□□ -2.27
SHG1YBR258C PAU22P0CE87 164 aa0.87□□□□□ -2.27
SHG1YBR258C PAU3P25610 124 aa0.87□□□□□ -2.27
SHG1YBR258C YHL005CP38752 130 aa0.87□□□□□ -2.27
SHG1YBR258C PAU15P40585 124 aa0.87□□□□□ -2.27
SHG1YBR258C MVB12P42939 101 aa0.87□□□□□ -2.27
SHG1YBR258C YJL009WP47078 108 aa0.87□□□□□ -2.27
SHG1YBR258C RBL2P48606 106 aaKnown RBP0.87□□□□□ -2.27
SHG1YBR258C YDR042CQ03205 200 aa0.87□□□□□ -2.27
SHG1YBR258C TVP18Q04767 167 aa0.87□□□□□ -2.27
SHG1YBR258C SUS1Q6WNK7 96 aa0.87□□□□□ -2.27
SHG1YBR258C COX7P10174 60 aa0.86□□□□□ -2.27
SHG1YBR258C ACP1P32463 125 aa0.86□□□□□ -2.27
SHG1YBR258C UTP11P34247 250 aaPredicted RBP0.86□□□□□ -2.27
SHG1YBR258C YAR029WP39549 74 aa0.86□□□□□ -2.27
SHG1YBR258C YEA6P39953 335 aa0.86□□□□□ -2.27
SHG1YBR258C LSM8P47093 109 aaKnown RBP0.86□□□□□ -2.27
SHG1YBR258C FUN14P18411 198 aa0.85□□□□□ -2.27
SHG1YBR258C NAT5Q08689 176 aa0.85□□□□□ -2.27
SHG1YBR258C HAP3P13434 144 aa0.84□□□□□ -2.27
SHG1YBR258C PAU16P35994 123 aa0.84□□□□□ -2.27
SHG1YBR258C VMA7P39111 118 aa0.84□□□□□ -2.27
SHG1YBR258C YJR128WP47162 119 aa0.84□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms