RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C UTR5P32630 166 aa1.66□□□□□ -2.14
CLN3YAL040C UGX2P32772 223 aa1.66□□□□□ -2.14
CLN3YAL040C MRPL24P36525 258 aaPredicted RBP1.66□□□□□ -2.14
CLN3YAL040C NRG2P38082 220 aa1.66□□□□□ -2.14
CLN3YAL040C YER181CP40097 107 aa1.66□□□□□ -2.14
CLN3YAL040C YFL019CP43576 117 aa1.66□□□□□ -2.14
CLN3YAL040C MGR2Q02889 113 aa1.66□□□□□ -2.14
CLN3YAL040C VPS71Q03433 280 aa1.66□□□□□ -2.14
CLN3YAL040C TVP18Q04767 167 aa1.66□□□□□ -2.14
CLN3YAL040C YLR042CQ07990 161 aa1.66□□□□□ -2.14
CLN3YAL040C MRPL44P19956 98 aa1.65□□□□□ -2.15
CLN3YAL040C COX10P21592 462 aa1.65□□□□□ -2.15
CLN3YAL040C MPC2P38857 129 aa1.65□□□□□ -2.15
CLN3YAL040C YEL067CP39978 195 aa1.65□□□□□ -2.15
CLN3YAL040C YDR274CP87283 123 aa1.65□□□□□ -2.15
CLN3YAL040C YMR103CQ04436 120 aa1.65□□□□□ -2.15
CLN3YAL040C FCF1Q05498 189 aaPredicted RBP1.65□□□□□ -2.15
CLN3YAL040C FYV7Q12247 151 aa1.65□□□□□ -2.15
CLN3YAL040C YAR023CD6VPM8 179 aa1.64□□□□□ -2.15
CLN3YAL040C PFY1P07274 126 aa1.64□□□□□ -2.15
CLN3YAL040C YCR001WP25347 104 aa1.64□□□□□ -2.15
CLN3YAL040C ARC15P40518 154 aaRIP-Chip data1.64□□□□□ -2.15not detected
CLN3YAL040C YGL230CP53074 147 aa1.64□□□□□ -2.15
CLN3YAL040C SMD1Q02260 146 aaPredicted RBP1.64□□□□□ -2.15
CLN3YAL040C YDR042CQ03205 200 aa1.64□□□□□ -2.15
CLN3YAL040C YIR021W-AQ3E739 70 aa1.64□□□□□ -2.15
CLN3YAL040C COA3Q3E7B2 85 aa1.64□□□□□ -2.15
CLN3YAL040C YML100W-AQ8TGT0 57 aa1.64□□□□□ -2.15
CLN3YAL040C RPS11AP0CX47 156 aaKnown RBP1.63□□□□□ -2.15
CLN3YAL040C RPS11BP0CX48 156 aaKnown RBP1.63□□□□□ -2.15
CLN3YAL040C YRA2P36036 203 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
CLN3YAL040C YBR209WP38311 105 aa1.63□□□□□ -2.15
CLN3YAL040C YHR125WP38831 101 aa1.63□□□□□ -2.15
CLN3YAL040C KRE9P39005 276 aa1.63□□□□□ -2.15
CLN3YAL040C VTC1P40046 129 aaRIP-Chip data1.63□□□□□ -2.15not detected
CLN3YAL040C YNL217WP40152 326 aa1.63□□□□□ -2.15
CLN3YAL040C DCV1P43595 202 aa1.63□□□□□ -2.15
CLN3YAL040C TOS6P48560 102 aa1.63□□□□□ -2.15
CLN3YAL040C YOL014WQ08110 124 aa1.63□□□□□ -2.15
CLN3YAL040C AUA1P32450 94 aa1.63□□□□□ -2.15
CLN3YAL040C YKR070WP36151 352 aaKnown RBP1.63□□□□□ -2.15
CLN3YAL040C MSL1P40567 111 aaPredicted RBP1.63□□□□□ -2.15
CLN3YAL040C YJR146WP47174 117 aa1.63□□□□□ -2.15
CLN3YAL040C COX12Q01519 83 aa1.63□□□□□ -2.15
CLN3YAL040C RDS3Q06835 107 aaPredicted RBP1.63□□□□□ -2.15
CLN3YAL040C YIL059CP40520 121 aa1.62□□□□□ -2.15
CLN3YAL040C YNR077CP53758 84 aa1.62□□□□□ -2.15
CLN3YAL040C AIM11P87275 137 aa1.62□□□□□ -2.15
CLN3YAL040C SAE3P89114 91 aa1.62□□□□□ -2.15
CLN3YAL040C UBC5P15732 148 aa1.61□□□□□ -2.15
CLN3YAL040C YBR219CP38317 127 aa1.61□□□□□ -2.15
CLN3YAL040C YEL008WP40001 126 aa1.61□□□□□ -2.15
CLN3YAL040C CWC27Q02770 301 aa1.61□□□□□ -2.15
CLN3YAL040C PAU23Q07987 124 aa1.61□□□□□ -2.15
CLN3YAL040C YPL261CQ08976 102 aa1.61□□□□□ -2.15
CLN3YAL040C PAU17Q12370 124 aa1.61□□□□□ -2.15
CLN3YAL040C YOR008C-AQ3E7B9 74 aa1.61□□□□□ -2.15
CLN3YAL040C YNL277W-AQ3E7Z0 62 aa1.61□□□□□ -2.15
CLN3YAL040C MID2P36027 376 aa1.6□□□□□ -2.15
CLN3YAL040C SFT1P43682 97 aa1.6□□□□□ -2.15
CLN3YAL040C YNL190WP53872 204 aa1.6□□□□□ -2.15
CLN3YAL040C YOR268CQ08734 132 aa1.6□□□□□ -2.15
CLN3YAL040C MDN1Q12019 4910 aaKnown RBP1.6□□□□□ -2.15
CLN3YAL040C YGL193CP53097 103 aa1.6□□□□□ -2.15
CLN3YAL040C PMP3P87284 55 aa1.6□□□□□ -2.15
CLN3YAL040C ELC1Q03071 99 aa1.6□□□□□ -2.15
CLN3YAL040C ATP20Q12233 115 aa1.6□□□□□ -2.15
CLN3YAL040C RAD6P06104 172 aa1.59□□□□□ -2.16
CLN3YAL040C HAP3P13434 144 aa1.59□□□□□ -2.16
CLN3YAL040C DDR48P18899 430 aaKnown RBP1.59□□□□□ -2.16
CLN3YAL040C ANB1P19211 157 aa1.59□□□□□ -2.16
CLN3YAL040C YKL044WP36092 106 aa1.59□□□□□ -2.16
CLN3YAL040C MPC3P53311 146 aa1.59□□□□□ -2.16
CLN3YAL040C MRPS12P53732 153 aa1.59□□□□□ -2.16
CLN3YAL040C HAL1Q01766 294 aa1.59□□□□□ -2.16
CLN3YAL040C YMR295CQ03559 197 aa1.59□□□□□ -2.16
CLN3YAL040C YLR194CQ05777 254 aa1.59□□□□□ -2.16
CLN3YAL040C VAM10Q08474 114 aa1.59□□□□□ -2.16
CLN3YAL040C YHR032W-AP0C5N6 59 aa1.58□□□□□ -2.16
CLN3YAL040C YNL198CP40166 100 aa1.58□□□□□ -2.16
CLN3YAL040C SGF11Q03067 99 aa1.58□□□□□ -2.16
CLN3YAL040C YLR363W-AQ3E747 85 aa1.58□□□□□ -2.16
CLN3YAL040C YGR240C-AQ3E786 66 aa1.58□□□□□ -2.16
CLN3YAL040C YCR075W-AQ3E830 75 aa1.58□□□□□ -2.16
CLN3YAL040C YMR122W-AQ3E842 84 aa1.58□□□□□ -2.16
CLN3YAL040C SHU1P38751 150 aa1.57□□□□□ -2.16
CLN3YAL040C FYV12Q08559 129 aa1.57□□□□□ -2.16
CLN3YAL040C YOR381W-AQ3E804 55 aa1.57□□□□□ -2.16
CLN3YAL040C RRT15Q3E811 62 aa1.57□□□□□ -2.16
CLN3YAL040C YLL066W-BQ8TGJ7 56 aa1.57□□□□□ -2.16
CLN3YAL040C SBH1P52870 82 aa1.57□□□□□ -2.16
CLN3YAL040C LIP1Q03579 150 aa1.57□□□□□ -2.16
CLN3YAL040C RPL33AP05744 107 aaKnown RBP1.56□□□□□ -2.16
CLN3YAL040C YEL045CP32616 141 aa1.56□□□□□ -2.16
CLN3YAL040C SVP26P38869 228 aa1.56□□□□□ -2.16
CLN3YAL040C YAL064WP39711 94 aa1.56□□□□□ -2.16
CLN3YAL040C RPL33BP41056 107 aaKnown RBP1.56□□□□□ -2.16
CLN3YAL040C YOR034C-AQ3E735 80 aa1.56□□□□□ -2.16
CLN3YAL040C KTI11Q3E840 82 aa1.56□□□□□ -2.16
CLN3YAL040C YAL065CO13511 128 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms