RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 DMGDHQ9UI17 866 aaKnown RBP18.47■□□□□ 0.55
PHGDH-232ENST00000641947 LCMT1Q9UIC8 334 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 COL4A4P53420 1690 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-232ENST00000641947 HHLA1C9JL84 531 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 TADA2AO75478 443 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 GALTP07902 379 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 VSNL1P62760 191 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 TUBB4BP68371 445 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 DEFB103AP81534 67 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 SLC7A5Q01650 507 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 CCDC14Q49A88 953 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 KCTD13Q8WZ19 329 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 PLEKHA4Q9H4M7 779 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 RAB21Q9UL25 225 aa18.47■□□□□ 0.55
PHGDH-232ENST00000641947 DPYSL4O14531 572 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 ZMYND10O75800 440 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 DGKIO75912 1065 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 OAZ2O95190 189 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 PDGFRAP16234 1089 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 TFE3P19532 575 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-232ENST00000641947 BDNFP23560 247 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 ACADSBP45954 432 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 CYP4V2Q6ZWL3 525 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-232ENST00000641947 SLC26A9Q7LBE3 791 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 ZDHHC17Q8IUH5 632 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 SMARCD1Q96GM5 515 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 PEBP4Q96S96 227 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 MRPL9Q9BYD2 267 aaKnown RBP18.46■□□□□ 0.55
PHGDH-232ENST00000641947 CWH43Q9H720 699 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 CSNK1G1Q9HCP0 422 aa18.46■□□□□ 0.55
PHGDH-232ENST00000641947 GREB1Q4ZG55 1949 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 PI4K2BG5E9Z4 385 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 EN2P19622 333 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-232ENST00000641947 RBM10P98175 930 aaKnown RBP18.45■□□□□ 0.54
PHGDH-232ENST00000641947 SMTNL2Q2TAL5 461 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 VARS2Q5ST30 1063 aaKnown RBP18.45■□□□□ 0.54
PHGDH-232ENST00000641947 LRRC38Q5VT99 294 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 THEM5Q8N1Q8 247 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 LRRC43Q8N309 656 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 PRELID2Q8N945 189 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 CNPY3Q9BT09 278 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 MCOLN1Q9GZU1 580 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 FAN1Q9Y2M0 1017 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
PHGDH-232ENST00000641947 ARHGEF37A1IGU5 675 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 RAD51CO43502 376 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 ALDH2P05091 517 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 ACRP10323 421 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 MIPP30301 263 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 CLCN6P51797 869 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 CDO1Q16878 200 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 RAB41Q5JT25 222 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 KCNT1Q5JUK3 1230 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 FAM171A1Q5VUB5 890 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 MFSD5Q6N075 450 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 C8orf74Q6P047 294 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 EXD1Q8NHP7 514 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 RAPGEF5Q92565 580 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 TMEM175Q9BSA9 504 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 C11orf84Q9BUA3 381 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-232ENST00000641947 ZCWPW1Q9H0M4 648 aa18.45■□□□□ 0.54
PHGDH-232ENST00000641947 RC3H2Q9HBD1 1191 aaKnown RBP18.45■□□□□ 0.54
PHGDH-232ENST00000641947 TARSL2A2RTX5 802 aaKnown RBP18.44■□□□□ 0.54
PHGDH-232ENST00000641947 ZSCAN5CA6NGD5 496 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-232ENST00000641947 CCDC188H7C350 402 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 FSCN2O14926 492 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 SYN3O14994 580 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 KRT1P04264 644 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 RARAP10276 462 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 RAG1P15918 1043 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 FGFR3P22607 806 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 SCNN1AP37088 669 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 PLXNA3P51805 1871 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 TKTL1P51854 596 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 SLC8A3P57103 927 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 ATP11AP98196 1134 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 TSPY1Q01534 308 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 ADCY2Q08462 1091 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 MRPL58Q14197 206 aaKnown RBP18.44■□□□□ 0.54
PHGDH-232ENST00000641947 FUT10Q6P4F1 479 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 HFE2Q6ZVN8 426 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 BHLHA9Q7RTU4 235 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 TAS1R1Q7RTX1 841 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 TOP1MTQ969P6 601 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 RNF25Q96BH1 459 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-232ENST00000641947 SLITRK1Q96PX8 696 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 COLEC11Q9BWP8 271 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 ZWILCHQ9H900 591 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 CALCOCO1Q9P1Z2 691 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 PCSK1NQ9UHG2 260 aa18.44■□□□□ 0.54
PHGDH-232ENST00000641947 C3orf70A6NLC5 250 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-232ENST00000641947 SART1O43290 800 aaKnown RBP18.43■□□□□ 0.54
PHGDH-232ENST00000641947 TRAPPC3O43617 180 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 EFEMP2O95967 443 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 RALAP11233 206 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 SNX16P57768 344 aa18.43■□□□□ 0.54
PHGDH-232ENST00000641947 WDR5P61964 334 aaKnown RBP18.43■□□□□ 0.54
PHGDH-232ENST00000641947 MRPS5P82675 430 aaKnown RBP18.43■□□□□ 0.54
PHGDH-232ENST00000641947 KLF1Q13351 362 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms