RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GRAP2O75791 330 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 GABBR2O75899 941 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 TRUB2O95900 331 aaKnown RBP17.23■□□□□ 0.35
PHGDH-216ENST00000641375 GAS8O95995 478 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 CYP11A1P05108 521 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 COL6A1P12109 1028 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 IL1R2P27930 398 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 CDKN2BP42772 138 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 PPP1R7Q15435 360 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 URGCPQ8TCY9 931 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 DEFB118Q96PH6 123 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 MED10Q9BTT4 135 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 B3GNT5Q9BYG0 378 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 TRIM31Q9BZY9 425 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 CHST7Q9NS84 486 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 KANSL3Q9P2N6 904 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 TSC2P49815 1807 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 M0QZQ0 153 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 FAM153BP0C7A2 387 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 FAM200BP0CF97 657 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 LCP1P13796 627 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 KCNJ1P48048 391 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 SMTNL2Q2TAL5 461 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 FAM153CQ494X1 144 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 CCDC14Q49A88 953 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 HSP90B2PQ58FF3 399 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 EFHC1Q5JVL4 640 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 PIGZQ86VD9 579 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 KCTD13Q8WZ19 329 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 KHSRPQ92945 711 aaKnown RBP eCLIP17.23■□□□□ 0.35
PHGDH-216ENST00000641375 FAM129AQ9BZQ8 928 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 YY1AP1Q9H869 796 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 CRTAC1Q9NQ79 661 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 FAM153AQ9UHL3 310 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 OGDHLQ9ULD0 1010 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 TIMM13Q9Y5L4 95 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-216ENST00000641375 PRPSAP2O60256 369 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 KRT10P13645 584 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 LMNB2Q03252 620 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 SNX1Q13596 522 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 KCNT1Q5JUK3 1230 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 KIAA0319Q5VV43 1072 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 KAZNQ674X7 775 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 TRNP1Q6NT89 227 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 PAQR9Q6ZVX9 377 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 ANKS1BQ7Z6G8 1248 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 CMASQ8NFW8 434 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-216ENST00000641375 MYCBPAPQ8TBZ2 947 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 LINC01599Q8WXQ3 324 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 ATG4AQ8WYN0 398 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 LRRC45Q96CN5 670 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 CFAP57Q96MR6 1250 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 ACBD6Q9BR61 282 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 MED4Q9NPJ6 270 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 PCSK1NQ9UHG2 260 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 GOLGA6BA6NDN3 693 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 C3orf70A6NLC5 250 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-216ENST00000641375 KDELR1P24390 212 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 PTPN9P43378 593 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 TAF5Q15542 800 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 C15orf59Q2T9L4 293 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-216ENST00000641375 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 ALS2CLQ60I27 953 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 DRICH1Q6PGQ1 229 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-216ENST00000641375 CLEC20AQ6ZU45 233 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 KCTD6Q8NC69 237 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 ACSF2Q96CM8 615 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-216ENST00000641375 RNF208Q9H0X6 261 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 ELAC1Q9H777 363 aaKnown RBP17.22■□□□□ 0.35
PHGDH-216ENST00000641375 TMEM161AQ9NX61 479 aa17.22■□□□□ 0.35
PHGDH-216ENST00000641375 R3HDM2Q9Y2K5 976 aaKnown RBP17.22■□□□□ 0.35
PHGDH-216ENST00000641375 KRT17Q04695 432 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 MTFR1Q15390 333 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 TAZQ16635 292 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 CDO1Q16878 200 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 BOLA3Q53S33 107 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 RSPH1Q8WYR4 309 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 SUSD3Q96L08 255 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 CCDC114Q96M63 670 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 TBCBQ99426 244 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 FMO2Q99518 471 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 KRT82Q9NSB4 513 aa17.21■□□□□ 0.35
PHGDH-216ENST00000641375 CLDN5O00501 218 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 CCL5P13501 91 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 HSPA9P38646 679 aaKnown RBP17.21■□□□□ 0.34
PHGDH-216ENST00000641375 ATP11AP98196 1134 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.34
PHGDH-216ENST00000641375 PLEKHG4Q58EX7 1191 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 CLLU1OSQ5K130 101 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 CD300LGQ6UXG3 332 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 FAM172AQ8WUF8 416 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 APBB2Q92870 758 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 FRMD8P1Q9BZ68 369 aaPredicted RBP17.21■□□□□ 0.34
PHGDH-216ENST00000641375 NEUROG2Q9H2A3 272 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 LRRC4Q9HBW1 653 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.34
PHGDH-216ENST00000641375 SNX24Q9Y343 169 aa17.21■□□□□ 0.34
PHGDH-216ENST00000641375 MYBPHLA2RUH7 354 aa17.2■□□□□ 0.34
PHGDH-216ENST00000641375 NBNO60934 754 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms