RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 LRRC52Q8N7C0 313 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 BEST2Q8NFU1 509 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 DYDC1Q8WWB3 177 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 SLC4A5Q9BY07 1137 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 NXF3Q9H4D5 531 aaKnown RBP17.86■□□□□ 0.45
PHGDH-211ENST00000641213 GNEQ9Y223 722 aaKnown RBP17.86■□□□□ 0.45
PHGDH-211ENST00000641213 ACTL7BQ9Y614 415 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 BANF1O75531 89 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 GAD2Q05329 585 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 DPYSL3Q14195 570 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 HIC1Q14526 733 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 HIF1AQ16665 826 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 OLFML1Q6UWY5 402 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 ANKRD42Q8N9B4 389 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 NAT8LQ8N9F0 302 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CCDC197Q8NCU1 140 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 SLC35F5Q8WV83 523 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 OSBPL7Q9BZF2 842 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 VPS37BQ9H9H4 285 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 RNF19AQ9NV58 838 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 SLC5A4Q9NY91 659 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 CNTN3Q9P232 1028 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 GJD2Q9UKL4 321 aa17.86■□□□□ 0.45
PHGDH-211ENST00000641213 DPYSL4O14531 572 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 MCF2LO15068 1137 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 PRPSAP2O60256 369 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 RECQL4O94761 1208 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 ECM2O94769 699 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-211ENST00000641213 SETSIPP0DME0 302 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 RBP3P10745 1247 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 PCBP1Q15365 356 aaKnown RBP eCLIP17.85■□□□□ 0.452e-6■■■□□ 14.6
PHGDH-211ENST00000641213 C9orf57Q5W0N0 161 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 NPNTQ6UXI9 565 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 TMEM110Q86TL2 294 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 TDRPQ86YL5 185 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 FAM71DQ8N9W8 422 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 SPATA18Q8TC71 538 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 KHSRPQ92945 711 aaKnown RBP eCLIP17.85■□□□□ 0.45
PHGDH-211ENST00000641213 MAK16Q9BXY0 300 aaKnown RBP17.85■□□□□ 0.45
PHGDH-211ENST00000641213 MLXIPLQ9NP71 852 aa17.85■□□□□ 0.45
PHGDH-211ENST00000641213 RASA4BC9J798 803 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 RASA4O43374 803 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 GABBR2O75899 941 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 ATP11AP98196 1134 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 SLC6A3Q01959 620 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 SOWAHAQ2M3V2 549 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 FNBP1LQ5T0N5 605 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 CAPN12Q6ZSI9 719 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 ANKMY2Q8IV38 441 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 SCUBE3Q8IX30 993 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 C2orf69Q8N8R5 385 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 LPIN3Q9BQK8 851 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 TRIM6Q9C030 488 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-211ENST00000641213 PHACTR1Q9C0D0 580 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 POC1B-GALNT4F8VUJ3 575 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 AKAP5P24588 427 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 MFSD10Q14728 455 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 NOMO1Q15155 1222 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 MSS51Q4VC12 460 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 MORN1Q5T089 497 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 TAX1BP1Q86VP1 789 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 PACS2Q86VP3 889 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 UNC93AQ86WB7 457 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 TAB3Q8N5C8 712 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-211ENST00000641213 OR6B3Q8NGW1 331 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 DNAJB3Q8WWF6 145 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 CKAP2Q8WWK9 683 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 LENG1Q96BZ8 264 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-211ENST00000641213 ELAC2Q9BQ52 826 aaKnown RBP17.84■□□□□ 0.45
PHGDH-211ENST00000641213 APOL6Q9BWW8 343 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 NSRP1Q9H0G5 558 aaKnown RBP17.84■□□□□ 0.45
PHGDH-211ENST00000641213 DPEP3Q9H4B8 488 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 SAMD15Q9P1V8 674 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 HESX1Q9UBX0 185 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 CPA4Q9UI42 421 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 CAPN7Q9Y6W3 813 aa17.84■□□□□ 0.45
PHGDH-211ENST00000641213 GOLGA6L7A0A1B0GV03 622 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 TCRBV7S3A2A0A539 114 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 PAPSS1O43252 624 aaPredicted RBP17.83■□□□□ 0.45
PHGDH-211ENST00000641213 RDXP35241 583 aaKnown RBP17.83■□□□□ 0.45
PHGDH-211ENST00000641213 ARL4CP56559 192 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 GPX6P59796 221 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 ADAM17P78536 824 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 ACTN3Q08043 901 aaPredicted RBP17.83■□□□□ 0.45
PHGDH-211ENST00000641213 ADCY1Q08828 1119 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 NR1H3Q13133 447 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 TFDP2Q14188 446 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 GPR162Q16538 588 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 TTC31Q49AM3 519 aaPredicted RBP17.83■□□□□ 0.45
PHGDH-211ENST00000641213 FAM47CQ5HY64 1035 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 OLFML2BQ68BL8 750 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 TLK2Q86UE8 772 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 TRABD2AQ86V40 505 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 TMEM40Q8WWA1 233 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 P3H4Q92791 437 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 RNF157Q96PX1 679 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 FLRT1Q9NZU1 646 aa17.83■□□□□ 0.45
PHGDH-211ENST00000641213 UBQLN1Q9UMX0 589 aaKnown RBP17.83■□□□□ 0.45
PHGDH-211ENST00000641213 CLUHO75153 1309 aa17.83■□□□□ 0.44
PHGDH-211ENST00000641213 TCP11X1B4DZS4 312 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms