RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 ACSL4O60488 711 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 SRGAP2O75044 1071 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 FOSP01100 380 aaPredicted RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 AFPP02771 609 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 YBX3P16989 372 aaKnown RBP eCLIP8.3□□□□□ -1.08
RTTN-223ENST00000640931 TCEA1P23193 301 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 RPA1P27694 616 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 TSPAN7P41732 249 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 RPL26P61254 145 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 RPS6P62753 249 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 NOP14P78316 857 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 PRKCEQ02156 737 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 RALGDSQ12967 914 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 UGCGQ16739 394 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 CEP55Q53EZ4 464 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 TMEM63BQ5T3F8 832 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 BORAQ6PGQ7 559 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 DBX2Q6ZNG2 339 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 NET1Q7Z628 596 aaPredicted RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 USP38Q8NB14 1042 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 SPATA4Q8NEY3 305 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 BIRC8Q96P09 236 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 ACAP3Q96P50 834 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 GPATCH1Q9BRR8 931 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 KIAA1683Q9H0B3 1180 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 SMARCAD1Q9H4L7 1026 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 FARSBQ9NSD9 589 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 FAM207AQ9NSI2 230 aaPredicted RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 NFS1Q9Y697 457 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 PCNTO95613 3336 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 TISP43B9A030 160 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 MCF2LO15068 1137 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 MUSKO15146 869 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 DKC1O60832 514 aaKnown RBP eCLIP8.3□□□□□ -1.08
RTTN-223ENST00000640931 GAS7O60861 476 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 GM2AP17900 193 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 RPS12P25398 132 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 PSMA3P25788 255 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 ADSLP30566 484 aaPredicted RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 EVI2BP34910 448 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 GNL1P36915 607 aaPredicted RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 CASP4P49662 377 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 RASSF2P50749 326 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 MLLT6P55198 1093 aaPredicted RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 MAP3K7CLP57077 242 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 PPP2R2BQ00005 443 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 SP4Q02446 784 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 KCNMA1Q12791 1236 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 BAATQ14032 418 aaPredicted RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 KCNJ8Q15842 424 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 TREML2Q5T2D2 321 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 RINT1Q6NUQ1 792 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 MOXD1Q6UVY6 613 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 DSTYKQ6XUX3 929 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 PPP1R21Q6ZMI0 780 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 USP43Q70EL4 1123 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 INTS8Q75QN2 995 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 DNAAF5Q86Y56 855 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.3□□□□□ -1.08
RTTN-223ENST00000640931 SCYL3Q8IZE3 742 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 GUF1Q8N442 669 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 TLCD1Q96CP7 247 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 CEP19Q96LK0 163 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 SAMD11Q96NU1 681 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 HSD17B14Q9BPX1 270 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 DDX50Q9BQ39 737 aaKnown RBP8.3□□□□□ -1.08
RTTN-223ENST00000640931 MXRA8Q9BRK3 442 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 TTYH3Q9C0H2 523 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 KCTD10Q9H3F6 313 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 NEK6Q9HC98 313 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 KCNH7Q9NS40 1196 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 DNM3Q9UQ16 869 aa8.3□□□□□ -1.08
RTTN-223ENST00000640931 KDM3AQ9Y4C1 1321 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 ZSCAN5BA6NJL1 495 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 GOLGA8JA6NMD2 632 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 C19orf81C9J6K1 198 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 VWA5AO00534 786 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 ENC1O14682 589 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 DHX15O43143 795 aaKnown RBP8.29□□□□□ -1.08
RTTN-223ENST00000640931 AP1G1O43747 822 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 USP2O75604 605 aaPredicted RBP8.29□□□□□ -1.08
RTTN-223ENST00000640931 ARHGEF15O94989 841 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 RBP3P10745 1247 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 COL6A1P12109 1028 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 CD53P19397 219 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 EEF1GP26641 437 aaKnown RBP8.29□□□□□ -1.08
RTTN-223ENST00000640931 HOXC13P31276 330 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 RPL5P46777 297 aaKnown RBP8.29□□□□□ -1.08
RTTN-223ENST00000640931 IST1P53990 364 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 SOX10P56693 466 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 BACE1P56817 501 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 HERVK_113P62684 666 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 SPAG1Q07617 926 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 ZNF844Q08AG5 666 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 NFE2Q16621 373 aaPredicted RBP8.29□□□□□ -1.08
RTTN-223ENST00000640931 KCTD21Q4G0X4 260 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 VWA3BQ502W6 1294 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 RNF43Q68DV7 783 aa8.29□□□□□ -1.08
RTTN-223ENST00000640931 PPP4R4Q6NUP7 873 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms