RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 AMPD2Q01433 879 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 CSTF1Q05048 431 aaKnown RBP14.64□□□□□ -0.07
PNKP-228ENST00000637325 INCA1Q0VD86 236 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 RUNX3Q13761 415 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 MTF1Q14872 753 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 PDGFRLQ15198 375 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 TRIM68Q6AZZ1 485 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 ZC3H14Q6PJT7 736 aaKnown RBP14.64□□□□□ -0.07
PNKP-228ENST00000637325 PAQR9Q6ZVX9 377 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 ZC3H3Q8IXZ2 948 aaKnown RBP14.64□□□□□ -0.07
PNKP-228ENST00000637325 FUKQ8N0W3 1084 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 C12orf29Q8N999 325 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 PDZD8Q8NEN9 1154 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 NELFBQ8WX92 580 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 SEMA4DQ92854 862 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 NKD2Q969F2 451 aaPredicted RBP14.64□□□□□ -0.07
PNKP-228ENST00000637325 FAM83CQ9BQN1 747 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 EBF3Q9H4W6 596 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 TMEM30AQ9NV96 361 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 RAB20Q9NX57 234 aa14.64□□□□□ -0.07
PNKP-228ENST00000637325 DUS2Q9NX74 493 aaKnown RBP14.64□□□□□ -0.07
PNKP-228ENST00000637325 MYO18AQ92614 2054 aaKnown RBP14.63□□□□□ -0.07
PNKP-228ENST00000637325 BICDL2A1A5D9 508 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 PROB1E7EW31 1015 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 FAM200BP0CF97 657 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 MAP3K7CLP57077 242 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 MCCD1P59942 119 aaPredicted RBP14.63□□□□□ -0.07
PNKP-228ENST00000637325 FZD5Q13467 585 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 PON2Q15165 354 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 CCDC40Q4G0X9 1142 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 TTC39CQ8N584 583 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 SH3RF2Q8TEC5 729 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 CYFIP2Q96F07 1278 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 FAXDC2Q96IV6 333 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 CEP63Q96MT8 703 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 TWNKQ96RR1 684 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 IER2Q9BTL4 223 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 CHRDQ9H2X0 955 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 METTL14Q9HCE5 456 aaKnown RBP14.63□□□□□ -0.07
PNKP-228ENST00000637325 HPS4Q9NQG7 708 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 COMMD8Q9NX08 183 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 CHORDC1Q9UHD1 332 aaPredicted RBP14.63□□□□□ -0.07
PNKP-228ENST00000637325 FBXO4Q9UKT5 387 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 ARHGAP26Q9UNA1 814 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 CTNND2Q9UQB3 1225 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 VPS13AQ96RL7 3174 aa14.63□□□□□ -0.07
PNKP-228ENST00000637325 CILPO75339 1184 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 MBL2P11226 248 aaPredicted RBP14.62□□□□□ -0.07
PNKP-228ENST00000637325 CHRNB1P11230 501 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 ARSAP15289 507 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 CD44P16070 742 aaKnown RBP14.62□□□□□ -0.07
PNKP-228ENST00000637325 SLC5A3P53794 718 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 USP4Q13107 963 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 MTAPQ13126 283 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 MORC3Q14149 939 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 PPP2R5DQ14738 602 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 ZNF77Q15935 545 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 ZNF394Q53GI3 561 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 DGKKQ5KSL6 1271 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 RALGAPA1Q6GYQ0 2036 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 TXNDC11Q6PKC3 985 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 FILIP1Q7Z7B0 1213 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 ZNF687Q8N1G0 1237 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 CPA6Q8N4T0 437 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 SCAMP5Q8TAC9 235 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 RIN3Q8TB24 985 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 OSCP1Q8WVF1 389 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 OVCA2Q8WZ82 227 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 ATP2A3Q93084 1043 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 EXOC4Q96A65 974 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 HEXIM2Q96MH2 286 aaKnown RBP14.62□□□□□ -0.07
PNKP-228ENST00000637325 HNRNPABQ99729 332 aaKnown RBP14.62□□□□□ -0.07
PNKP-228ENST00000637325 SMOQ99835 787 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 FBXO44Q9H4M3 255 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 WNT6Q9Y6F9 365 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 R4GN57 208 aa14.62□□□□□ -0.07
PNKP-228ENST00000637325 PPP1R3GB7ZBB8 358 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 LEFTY2O00292 366 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 TNFRSF10BO14763 440 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 TCF3P15923 654 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 CCR3P51677 355 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 STX17P56962 302 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 SLC7A9P82251 487 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 GRSF1Q12849 480 aaKnown RBP eCLIP14.61□□□□□ -0.07
PNKP-228ENST00000637325 NR1H3Q13133 447 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 ZNF528Q3MIS6 628 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 CBWD6Q4V339 395 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 CBWD3Q5JTY5 395 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 CBWD5Q5RIA9 395 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 HECTD3Q5T447 861 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 MAML2Q8IZL2 1156 aaPredicted RBP14.61□□□□□ -0.07
PNKP-228ENST00000637325 TATDN2Q93075 761 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 JAKMIP2Q96AA8 810 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 NACA2Q9H009 215 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 RNF38Q9H0F5 515 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 SEMA4AQ9H3S1 761 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 ECT2Q9H8V3 914 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 CSNK1G1Q9HCP0 422 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 CISHQ9NSE2 258 aa14.61□□□□□ -0.07
PNKP-228ENST00000637325 RBM12Q9NTZ6 932 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms