RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 MOSPD3O75425 235 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 CFHP08603 1231 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 SOX5P35711 763 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 STAT1P42224 750 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 SLC8A3P57103 927 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 BST2Q10589 180 aaKnown RBP18.17■□□□□ 0.5
CLN6-218ENST00000637223 STILQ15468 1287 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 TEAD2Q15562 447 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 DENND1BQ6P3S1 775 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 GAREM2Q75VX8 874 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 SCAMP5Q8TAC9 235 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 SHKBP1Q8TBC3 707 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 ZNF606Q8WXB4 792 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 GCNAQ96QF7 691 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 MYADMQ96S97 322 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 ATXN3LQ9H3M9 355 aa18.17■□□□□ 0.5
CLN6-218ENST00000637223 C2CD4DB7Z1M9 353 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 AP5Z1O43299 807 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 CYP4F8P98187 520 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 PKDCCQ504Y2 493 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 SMYD5Q6GMV2 418 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 PIGZQ86VD9 579 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 ADHFE1Q8IWW8 467 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 NPAS3Q8IXF0 933 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 TDRD5Q8NAT2 981 aaKnown RBP18.16■□□□□ 0.5
CLN6-218ENST00000637223 FGF13Q92913 245 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 SECISBP2LQ93073 1101 aaKnown RBP18.16■□□□□ 0.5
CLN6-218ENST00000637223 TRMT2BQ96GJ1 504 aaKnown RBP18.16■□□□□ 0.5
CLN6-218ENST00000637223 MYRFLQ96LU7 910 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 TTLL2Q9BWV7 592 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 UXTQ9UBK9 157 aaPredicted RBP18.16■□□□□ 0.5
CLN6-218ENST00000637223 WDFY4Q6ZS81 3184 aa18.16■□□□□ 0.5
CLN6-218ENST00000637223 XPO1O14980 1071 aaKnown RBP18.15■□□□□ 0.5
CLN6-218ENST00000637223 RTN3O95197 1032 aaPredicted RBP18.15■□□□□ 0.5
CLN6-218ENST00000637223 FGF19O95750 216 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 F11P03951 625 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 CYP11B1P15538 503 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 YWHAQP27348 245 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 CDC25CP30307 473 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 PDE6CP51160 858 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 BPIFB4P59827 614 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 ARID5AQ03989 594 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 TAF10Q12962 218 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 STXBP5Q5T5C0 1151 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 TAF3Q5VWG9 929 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 POTEHQ6S545 545 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 OTOP3Q7RTS5 596 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 TMEM150AQ86TG1 271 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 PASD1Q8IV76 773 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 BAP1Q92560 729 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 FBXO32Q969P5 355 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 ACSF2Q96CM8 615 aaPredicted RBP18.15■□□□□ 0.5
CLN6-218ENST00000637223 MCRS1Q96EZ8 462 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 TTYH3Q9C0H2 523 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 PNPLA8Q9NP80 782 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.15■□□□□ 0.52e-9■■■■■ 36.3
CLN6-218ENST00000637223 EHD2Q9NZN4 543 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 CDH7Q9ULB5 785 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 USTQ9Y2C2 406 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 NR2E1Q9Y466 385 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 C2orf16Q68DN1 1984 aa18.15■□□□□ 0.5
CLN6-218ENST00000637223 TADA3O75528 432 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 RGS7P49802 495 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 SARM1Q6SZW1 724 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 NOP9Q86U38 636 aaKnown RBP18.14■□□□□ 0.49
CLN6-218ENST00000637223 PRSS33Q8NF86 280 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 ST13P5Q8NFI4 369 aaPredicted RBP18.14■□□□□ 0.49
CLN6-218ENST00000637223 UBXN6Q9BZV1 441 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 TRIM5Q9C035 493 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 SLITRK6Q9H5Y7 841 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 MUTYHQ9UIF7 546 aa18.14■□□□□ 0.49
CLN6-218ENST00000637223 LRRC53A6NM62 1247 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 LOC730098B7Z3J9 87 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 KRT9P35527 623 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 PLA2G4AP47712 749 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 KIF11P52732 1056 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 ARHGAP15Q53QZ3 475 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 GPR158Q5T848 1215 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 IER5LQ5T953 404 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 PMF1Q6P1K2 205 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 EPS8L1Q8TE68 723 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 SLC20A1Q8WUM9 679 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 SLC35F5Q8WV83 523 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 CPLX3Q8WVH0 158 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 ZSWIM3Q96MP5 696 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 SLITRK1Q96PX8 696 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 NUP58Q9BVL2 599 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 PDCL3Q9H2J4 239 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 FBXO44Q9H4M3 255 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 COMMD8Q9NX08 183 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 IL37Q9NZH6 218 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 TRPM5Q9NZQ8 1165 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 GMIPQ9P107 970 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 PCDHGC3Q9UN70 934 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 PTPRDP23468 1912 aa18.13■□□□□ 0.49
CLN6-218ENST00000637223 PIK3R2O00459 728 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 ABL1P00519 1130 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 LAMP2P13473 410 aa18.12■□□□□ 0.49
CLN6-218ENST00000637223 GPD2P43304 727 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms