RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 CDH5P33151 784 aaPredicted RBP12.08□□□□□ -0.48
CLN6-217ENST00000636964 KCNA10Q16322 511 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 SGO2Q562F6 1265 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 C9orf57Q5W0N0 161 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 SPATA21Q7Z572 469 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 CCDC105Q8IYK2 499 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 SMG8Q8ND04 991 aaKnown RBP12.08□□□□□ -0.48
CLN6-217ENST00000636964 OR6B3Q8NGW1 331 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 MDM1Q8TC05 714 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 AGAP11Q8TF27 550 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 NME7Q9Y5B8 376 aa12.08□□□□□ -0.48
CLN6-217ENST00000636964 PHF2O75151 1096 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 TRPA1O75762 1119 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 RALAP11233 206 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 MAGEA10P43363 369 aaPredicted RBP12.07□□□□□ -0.48
CLN6-217ENST00000636964 RGS7P49802 495 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 SIX1Q15475 284 aaPredicted RBP12.07□□□□□ -0.48
CLN6-217ENST00000636964 ZNF618Q5T7W0 954 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 ACBD5Q5T8D3 534 aaPredicted RBP12.07□□□□□ -0.48
CLN6-217ENST00000636964 NT5DC4Q86YG4 428 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 RHOT1Q8IXI2 618 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 NT5C1AQ9BXI3 368 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 IP6K2Q9UHH9 426 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 TSPAN16Q9UKR8 245 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 SLC12A4Q9UP95 1085 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 SNX24Q9Y343 169 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 KRT3P12035 628 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 AXLP30530 894 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 HOXC8P31273 242 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 SESN3P58005 492 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 MRPS6P82932 125 aaKnown RBP12.07□□□□□ -0.48
CLN6-217ENST00000636964 SP3Q02447 781 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 TSNAXIP1Q2TAA8 658 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 THEMIS2Q5TEJ8 643 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 KAZNQ674X7 775 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 JAMLQ86YT9 394 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 CACNA2D3Q8IZS8 1091 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 SPDYE1Q8NFV5 336 aaPredicted RBP12.07□□□□□ -0.48
CLN6-217ENST00000636964 IRF2BPLQ9H1B7 796 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 LHX5Q9H2C1 402 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 DPEP3Q9H4B8 488 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 SPATA7Q9P0W8 599 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 CNTN3Q9P232 1028 aa12.07□□□□□ -0.48
CLN6-217ENST00000636964 M0QZ92 97 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 SPTLC1O15269 473 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 LINGO3P0C6S8 592 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 VDRP11473 427 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 GPD2P43304 727 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 AFF1P51825 1210 aaKnown RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 PPP1R7Q15435 360 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 PPP1R26Q5T8A7 1209 aaPredicted RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 TAF2Q6P1X5 1199 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 EZH1Q92800 747 aaPredicted RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 LPPQ93052 612 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 METTL5Q9NRN9 209 aaKnown RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 CHST7Q9NS84 486 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 ST3GAL5Q9UNP4 418 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 GRAP2O75791 330 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 CHRNA1P02708 482 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 GHRP10912 638 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 KRT10P13645 584 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 RAB27AP51159 221 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 IFFO1Q0D2I5 559 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 INCA1Q0VD86 236 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 LAMB3Q13751 1172 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 CNGA2Q16280 664 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 PPP1R2P3Q6NXS1 205 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 CAPNS2Q96L46 248 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 PLVAPQ9BX97 442 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 UBAP1Q9NZ09 502 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 UBQLN1Q9UMX0 589 aaKnown RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 R3HDM2Q9Y2K5 976 aaKnown RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 A8MUI8 341 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 FSCN2O14926 492 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 ALDH1A1P00352 501 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 PSMA2P25787 234 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 LMO2P25791 158 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 CHRNA3P32297 505 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 COILP38432 576 aaPredicted RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 PTGIRP43119 386 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 NOGQ13253 232 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 PCBP1Q15365 356 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLN6-217ENST00000636964 PPP1R15BQ5SWA1 713 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 XYLT1Q86Y38 959 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 PRCCQ92733 491 aaPredicted RBP12.06□□□□□ -0.48
CLN6-217ENST00000636964 ERP44Q9BS26 406 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 DERAQ9Y315 318 aa12.06□□□□□ -0.48
CLN6-217ENST00000636964 EIF4E1BA6NMX2 242 aaKnown RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 A8MXQ7 604 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 BHMG1C9JSJ3 638 aaPredicted RBP12.05□□□□□ -0.48
CLN6-217ENST00000636964 ADAMTS4O75173 837 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 THPOP40225 353 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 PPP2R2AP63151 447 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 CUL1Q13616 776 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 SMTNL2Q2TAL5 461 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 GOLGA7BQ2TAP0 167 aa12.05□□□□□ -0.48
CLN6-217ENST00000636964 DEFB115Q30KQ5 88 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms