RNA–Protein interactions for RNA: ENST00000636102.1

ARHGEF9-223, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 2,112 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-223	ENST00000636102	HTT	P42858	3142 aa		11.22	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CYP26A1	O43174	497 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CST5	P28325	142 aa	Predicted RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GSTT1	P30711	240 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	COIL	P38432	576 aa	Predicted RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CACNA2D1	P54289	1103 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	YARS	P54577	528 aa	Known RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CYP24A1	Q07973	514 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	USP4	Q13107	963 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ZNF211	Q13398	564 aa	Predicted RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ATF7IP2	Q5U623	682 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	EEF1DP3	Q658K8	133 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GDF6	Q6KF10	455 aa	Predicted RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ZDHHC24	Q6UX98	284 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TRIM72	Q6ZMU5	477 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TSHZ1	Q6ZSZ6	1077 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	CEP128	Q6ZU80	1094 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	RNF180	Q86T96	592 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ECHDC2	Q86YB7	292 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	ANKLE1	Q8NAG6	615 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GATA6	Q92908	595 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	MAGEB18	Q96M61	343 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	NR1H4	Q96RI1	486 aa	Predicted RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PCDHB18P	Q96TA0	734 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PTPRH	Q9HD43	1115 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	NMRK1	Q9NWW6	199 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	GTF2IRD1	Q9UHL9	959 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	PTPN22	Q9Y2R2	807 aa		11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	MYH9	P35579	1960 aa	Known RBP	11.21	□□□□□ -0.61
ARHGEF9-223	ENST00000636102	FSCN2	O14926	492 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TJP3	O95049	919 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ECEL1	O95672	775 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	GM2A	P17900	193 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PLTP	P55058	493 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	WNT7B	P56706	349 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MGAT5	Q09328	741 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PTP4A2	Q12974	167 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CALCOCO2	Q13137	446 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DBN1	Q16643	649 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TMEM132A	Q24JP5	1023 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ZNF410	Q86VK4	478 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LONP2	Q86WA8	852 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CCDC105	Q8IYK2	499 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PCSK9	Q8NBP7	692 aa	Known RBP	11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	STKLD1	Q8NE28	680 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LRRC8C	Q8TDW0	803 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ART4	Q93070	314 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CPB2	Q96IY4	423 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SERPINB12	Q96P63	405 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	HAPLN3	Q96S86	360 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	OSMR	Q99650	979 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DDX23	Q9BUQ8	820 aa	Known RBP	11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ZCWPW1	Q9H0M4	648 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ERVK-5	Q9HDB9	667 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	WHRN	Q9P202	907 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	NR2E1	Q9Y466	385 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PCDHB2	Q9Y5E7	798 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	COMMD3-BMI1	R4GMX3	469 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MGAM	O43451	1857 aa		11.21	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TMEM120B	A0PK00	339 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	RIPK2	O43353	540 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	LDHA	P00338	332 aa	Known RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ITIH2	P19823	946 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PROZ	P22891	400 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TNFSF9	P41273	254 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ACLY	P53396	1101 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CLDN10	P78369	228 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MCL1	Q07820	350 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	FAM187B	Q17R55	369 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CLEC16A	Q2KHT3	1053 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	WDR44	Q5JSH3	913 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SH2D4B	Q5SQS7	431 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SLC47A2	Q86VL8	602 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	BBOF1	Q8ND07	529 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PHC3	Q8NDX5	983 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	FBXO25	Q8TCJ0	367 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	EPS8L3	Q8TE67	593 aa	Known RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	KRT35	Q92764	455 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PPP1R14B	Q96C90	147 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	VCPIP1	Q96JH7	1222 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	FAM84A	Q96KN4	292 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TRIM31	Q9BZY9	425 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	MIS12	Q9H081	205 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	UNC93B1	Q9H1C4	597 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	TOPORS	Q9NS56	1045 aa	Predicted RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	C1orf112	Q9NSG2	853 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	GRHL1	Q9NZI5	618 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	G3BP2	Q9UN86	482 aa	Known RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	SNX24	Q9Y343	169 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ARID2	Q68CP9	1835 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	FAM189A1	O60320	539 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DCTN3	O75935	186 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	DLAT	P10515	647 aa	Known RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	PYGM	P11217	842 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	ARF4	P18085	180 aa	Predicted RBP	11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CDC42EP1	Q00587	391 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	RCN2	Q14257	317 aa		11.2	□□□□□ -0.62
ARHGEF9-223	ENST00000636102	CGB2	Q6NT52	195 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms