RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SPTBN5Q9NRC6 3674 aaKnown RBP16.31■□□□□ 0.2
CLN8-209ENST00000635970 COL6A3P12111 3177 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 C5orf67F2Z3F1 127 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 ADRB2P07550 413 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 GALTP07902 379 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 NFICP08651 508 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 OR1G1P47890 313 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 FMO5P49326 533 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 SLC29A2Q14542 456 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 TLDC1Q6P9B6 456 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 BRSK2Q8IWQ3 736 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 OLIG1Q8TAK6 271 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 RNF25Q96BH1 459 aaPredicted RBP16.3■□□□□ 0.2
CLN8-209ENST00000635970 SAMD11Q96NU1 681 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 TRIM31Q9BZY9 425 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 EBF2Q9HAK2 575 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 AJAP1Q9UKB5 411 aaPredicted RBP16.3■□□□□ 0.2
CLN8-209ENST00000635970 PCDHB12Q9Y5F1 795 aa16.3■□□□□ 0.2
CLN8-209ENST00000635970 NRP1O14786 923 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 LPXNO60711 386 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 LDHAP00338 332 aaKnown RBP16.29■□□□□ 0.2
CLN8-209ENST00000635970 SHBGP04278 402 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 ITGB1P05556 798 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 KCNE1P15382 129 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 IGFBP6P24592 240 aaPredicted RBP16.29■□□□□ 0.2
CLN8-209ENST00000635970 PTGIRP43119 386 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 ALDH7A1P49419 539 aaKnown RBP16.29■□□□□ 0.2
CLN8-209ENST00000635970 CASP4P49662 377 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 SNRPFP62306 86 aaKnown RBP16.29■□□□□ 0.2
CLN8-209ENST00000635970 TUSC3Q13454 348 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 MYBPC2Q14324 1141 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 CYP1B1Q16678 543 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 JADE1Q6IE81 842 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 TRMT10CQ7L0Y3 403 aaKnown RBP16.29■□□□□ 0.2
CLN8-209ENST00000635970 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 XXYLT1Q8NBI6 393 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 FBXO25Q8TCJ0 367 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 KIF12Q96FN5 646 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 GUCD1Q96NT3 240 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 AAASQ9NRG9 546 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 GRHL1Q9NZI5 618 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 APEX2Q9UBZ4 518 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 XIRP2A4UGR9 3374 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 PRUNE2Q8WUY3 3088 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 GRM6O15303 877 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 FGF18O76093 207 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 GPM6BQ13491 265 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 SNRNP35Q16560 246 aaKnown RBP16.29■□□□□ 0.2
CLN8-209ENST00000635970 LRRC34Q8IZ02 419 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 MAB21L3Q8N8X9 362 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 HASPINQ8TF76 798 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 FBXL18Q96ME1 805 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 PLEKHA5Q9HAU0 1116 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 MARCH5Q9NX47 278 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 FRMD4BQ9Y2L6 1034 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 NR2E1Q9Y466 385 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 ALG6Q9Y672 507 aa16.29■□□□□ 0.2
CLN8-209ENST00000635970 H3BNC9 293 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 O00370 1275 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 RASGRF2O14827 1237 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 EXOC3O60645 756 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 ALADP13716 330 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 DNAJB1P25685 340 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 CLCNKBP51801 687 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 ADGRE1Q14246 886 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 PTPROQ16827 1216 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 MYLIPQ8WY64 445 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 TMEM175Q9BSA9 504 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 C11orf84Q9BUA3 381 aaPredicted RBP16.28■□□□□ 0.2
CLN8-209ENST00000635970 PLVAPQ9BX97 442 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 DMAC2Q9NW81 257 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.28■□□□□ 0.2
CLN8-209ENST00000635970 SNX24Q9Y343 169 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 PTPRJQ12913 1337 aa16.28■□□□□ 0.2
CLN8-209ENST00000635970 TLDC2A0PJX2 215 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 RIPK2O43353 540 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 SNX3O60493 162 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 MTA2O94776 668 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 RB1P06400 928 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 KRT13P13646 458 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 SEL1L2Q5TEA6 688 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 LMBRD2Q68DH5 695 aaPredicted RBP16.27■□□□□ 0.2
CLN8-209ENST00000635970 ART4Q93070 314 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 IGSF21Q96ID5 467 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 SERPINB12Q96P63 405 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 CDX2Q99626 313 aaPredicted RBP16.27■□□□□ 0.2
CLN8-209ENST00000635970 PRMT1Q99873 361 aaKnown RBP16.27■□□□□ 0.2
CLN8-209ENST00000635970 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 SPG21Q9NZD8 308 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 VWA8A3KMH1 1905 aa16.27■□□□□ 0.2
CLN8-209ENST00000635970 P4HA2O15460 535 aa16.27■□□□□ 0.19
CLN8-209ENST00000635970 SUN1O94901 812 aa16.27■□□□□ 0.19
CLN8-209ENST00000635970 VIMP08670 466 aaKnown RBP16.27■□□□□ 0.19
CLN8-209ENST00000635970 ABCB4P21439 1286 aa16.27■□□□□ 0.19
CLN8-209ENST00000635970 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.19
CLN8-209ENST00000635970 PPM1AP35813 382 aa16.27■□□□□ 0.19
CLN8-209ENST00000635970 PSEN1P49768 467 aa16.27■□□□□ 0.19
CLN8-209ENST00000635970 TMEM132DQ14C87 1099 aa16.27■□□□□ 0.19
CLN8-209ENST00000635970 CNGA2Q16280 664 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms