RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 EIF3DO15371 548 aaKnown RBP eCLIP10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 PRKCBP05771 671 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 TMEM253P0C7T8 217 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 TPBGLP0DKB5 382 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 ERVK-10P10266 1014 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 TWF1Q12792 350 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 DHDDSQ86SQ9 333 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 SGMS1Q86VZ5 419 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 NLRP10Q86W26 655 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 AGR3Q8TD06 166 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 RAD54LQ92698 747 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 C7orf25Q9BPX7 421 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 NFKBIZQ9BYH8 718 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 SLC13A1Q9BZW2 595 aa10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 RPRD1BQ9NQG5 326 aaKnown RBP10.2□□□□□ -0.78
SPTAN1-228ENST00000635853 C2CD2LO14523 706 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 ANGPT2O15123 496 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 TM9SF1O15321 606 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 TBC1D12O60347 775 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 QARSP47897 775 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 RFX3P48380 749 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 GEMIN4P57678 1058 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 CDK16Q00536 496 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 PPP1R36Q96LQ0 422 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 NOL6Q9H6R4 1146 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 ARHGAP20Q9P2F6 1191 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 RPS6KB2Q9UBS0 482 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 TAF6LQ9Y6J9 622 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 ARAP3Q8WWN8 1544 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 C1orf232A0A0U1RR37 186 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 FAM237AA0A1B0GTK4 181 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 RNASEH1O60930 286 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 HARS2P49590 506 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 FCGRTP55899 365 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 CCDC142Q17RM4 750 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 ALFQ53S48 1182 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 CMPK2Q5EBM0 449 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 PTRHD1Q6GMV3 140 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 OXNAD1Q96HP4 312 aaPredicted RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 INTS2Q9H0H0 1204 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 GPAMQ9HCL2 828 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 KRCC1Q9NPI7 259 aaPredicted RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 TRNAU1APQ9NX07 287 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 GTF2A1LQ9UNN4 478 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 GALCP54803 685 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 PLOD1Q02809 727 aaPredicted RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 EN1Q05925 392 aaPredicted RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 GPS1Q13098 491 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 SUSD4Q5VX71 490 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 PACS1Q6VY07 963 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 UCMAQ8WVF2 138 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 MTA3Q9BTC8 594 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 DCUN1D5Q9BTE7 237 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 APOL5Q9BWW9 433 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 RAD21L1Q9H4I0 556 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 TRMUO75648 421 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 TMEM132BQ14DG7 1078 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 ZC3H12AQ5D1E8 599 aaKnown RBP10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 ZNF618Q5T7W0 954 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 COQ6Q9Y2Z9 468 aa10.19□□□□□ -0.78
SPTAN1-228ENST00000635853 A6NHS1 94 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 DDX3XO00571 662 aaKnown RBP eCLIP10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 CYTH3O43739 400 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 GH1P01241 217 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 SLC16A1P53985 500 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 HMGCS2P54868 508 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 NAA20P61599 178 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 PDIA5Q14554 519 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 FRMD5Q7Z6J6 570 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 TRIM69Q86WT6 500 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 FAM162AQ96A26 154 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 ADNPQ9H2P0 1102 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 SEMA4AQ9H3S1 761 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 ETNK2Q9NVF9 386 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 FBXL21Q9UKT6 434 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 AURKCQ9UQB9 309 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 PRG3Q9Y2Y8 225 aaPredicted RBP10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 TTLL13PA6NNM8 815 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 CAPN15O75808 1086 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 SHBGP04278 402 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 TYK2P29597 1187 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 TTKP33981 857 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 CDH6P55285 790 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 CENPCQ03188 943 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 PTPN12Q05209 780 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 TMEM132DQ14C87 1099 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 SETD3Q86TU7 594 aaPredicted RBP10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 RNF149Q8NC42 400 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 SLC7A14Q8TBB6 771 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 C18orf8Q96DM3 657 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 PABPC5Q96DU9 382 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 MFSD1Q9H3U5 465 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 STMN3Q9NZ72 180 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 NEU2Q9Y3R4 380 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 DISP1Q96F81 1524 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 C3orf70A6NLC5 250 aaPredicted RBP10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 AP3B1O00203 1094 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 MYBP10242 640 aa10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 OTUD4Q01804 1114 aaKnown RBP10.18□□□□□ -0.78
SPTAN1-228ENST00000635853 FOLH1Q04609 750 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms