RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CYP1A1P04798 512 aaPredicted RBP15.23■□□□□ 0.03
LINC00339-208ENST00000634934 EPCAMP16422 314 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 CASQ1P31415 396 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 CYLC1P35663 651 aaPredicted RBP15.23■□□□□ 0.03
LINC00339-208ENST00000634934 RPL10AP62906 217 aaKnown RBP15.23■□□□□ 0.03
LINC00339-208ENST00000634934 NOMO3P69849 1222 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 MTF1Q14872 753 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 DUSP6Q16828 381 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 ERCC6LQ2NKX8 1250 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 ASTE1Q2TB18 679 aaPredicted RBP15.23■□□□□ 0.03
LINC00339-208ENST00000634934 LIN9Q5TKA1 542 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 ZNF662Q6ZS27 426 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 TCEAL8Q8IYN2 117 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 CCDC170Q8IYT3 715 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 WDTC1Q8N5D0 677 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 SLC30A5Q8TAD4 765 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 SLC7A14Q8TBB6 771 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 PKNOX2Q96KN3 472 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 NOX5Q96PH1 765 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 TAS2R14Q9NYV8 317 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 CYTH4Q9UIA0 394 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 FBXW11Q9UKB1 542 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 MAFFQ9ULX9 164 aa15.23■□□□□ 0.03
LINC00339-208ENST00000634934 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 XPO1O14980 1071 aaKnown RBP15.22■□□□□ 0.03
LINC00339-208ENST00000634934 FANCGO15287 622 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 NSFP46459 744 aaKnown RBP15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ALDH1A3P47895 512 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 SLC18A3Q16572 532 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 TCEAL5Q5H9L2 206 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 CCDC122Q5T0U0 273 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 PMF1Q6P1K2 205 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ALKBH5Q6P6C2 394 aaKnown RBP15.22■□□□□ 0.03
LINC00339-208ENST00000634934 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 CCDC149Q6ZUS6 474 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 PIGZQ86VD9 579 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ZMIZ2Q8NF64 920 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 GPR152Q8TDT2 470 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 SLC22A17Q8WUG5 538 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 SLC35F5Q8WV83 523 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 C8orf48Q96LL4 319 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 UBXN6Q9BZV1 441 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 SYNCQ9H7C4 482 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 CSNK1G1Q9HCP0 422 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 PRDM6Q9NQX0 595 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 MAN1C1Q9NR34 630 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ZNF446Q9NWS9 450 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 LMCD1Q9NZU5 365 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 HSFX1Q9UBD0 423 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 YIPF1Q9Y548 306 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ADGRG1Q9Y653 693 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 PIK3R2O00459 728 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 C8AP07357 584 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 UNGP13051 313 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-208ENST00000634934 CDH5P33151 784 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-208ENST00000634934 PLA2G4AP47712 749 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 CLCN6P51797 869 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 TWF1Q12792 350 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 PDCLQ13371 301 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 TERF2Q15554 542 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ACAD10Q6JQN1 1059 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 ERICH1Q86X53 443 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 DNAAF5Q86Y56 855 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 STKLD1Q8NE28 680 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 GIPC2Q8TF65 315 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 CDCA3Q99618 268 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-208ENST00000634934 NAGPAQ9UK23 515 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 INSL5Q9Y5Q6 135 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 HCFC2Q9Y5Z7 792 aa15.22■□□□□ 0.03
LINC00339-208ENST00000634934 EPN1Q9Y6I3 576 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-208ENST00000634934 NDUFA10O95299 355 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 IPO7O95373 1038 aaKnown RBP15.21■□□□□ 0.03
LINC00339-208ENST00000634934 SLC34A2O95436 690 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 C1RP00736 705 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 FTLP02792 175 aaPredicted RBP15.21■□□□□ 0.03
LINC00339-208ENST00000634934 GZMAP12544 262 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 VCANP13611 3396 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 LCP1P13796 627 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 CENPCQ03188 943 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 IFRD2Q12894 506 aaPredicted RBP15.21■□□□□ 0.03
LINC00339-208ENST00000634934 SPA17Q15506 151 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 ELMSAN1Q6PJG2 1045 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 TMCO3Q6UWJ1 677 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 MSANTD4Q8NCY6 345 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 IPO4Q8TEX9 1081 aaKnown RBP15.21■□□□□ 0.03
LINC00339-208ENST00000634934 STK32AQ8WU08 396 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 HNRNPLLQ8WVV9 542 aaKnown RBP15.21■□□□□ 0.03
LINC00339-208ENST00000634934 HSFY1Q96LI6 401 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 C11orf70Q9BRQ4 267 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 PLEKHA4Q9H4M7 779 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 LRRC4Q9HBW1 653 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 DPP7Q9UHL4 492 aa15.21■□□□□ 0.03
LINC00339-208ENST00000634934 HHLA1C9JL84 531 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 RTN2O75298 545 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
LINC00339-208ENST00000634934 LRG1P02750 347 aa15.2■□□□□ 0.02
LINC00339-208ENST00000634934 ATF6P18850 670 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms