RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 THUMPD3Q9BV44 507 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 PDGFCQ9NRA1 345 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 SLC22A9Q8IVM8 553 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 KLHL25Q9H0H3 589 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 ZNF638Q14966 1978 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 PNMA8CA0A1B0GUJ8 204 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 TIMM44O43615 452 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 KRT34O76011 436 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 AKAP5P24588 427 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 NUDT2P50583 147 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 PLD1Q13393 1074 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 WDR72Q3MJ13 1102 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 BCL2L14Q9BZR8 327 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 ALG13Q9NP73 1137 aaKnown RBP13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 RAD18Q9NS91 495 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 POLR1DQ9Y2S0 133 aa13.64□□□□□ -0.23
SYNGAP1-208ENST00000629380 MGAT4DA6NG13 374 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 PLEKHA8P1O95397 391 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 MYL12AP19105 171 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 CEP44Q9C0F1 390 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 PPP2R3BQ9Y5P8 575 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 CCDC189A1A4V9 331 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 MCAMP43121 646 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 SPP2Q13103 211 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 LRRC14Q15048 493 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 COMMD2Q86X83 199 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 A0A0G2JLW4 131 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 SFI1A8K8P3 1242 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 CDC25AP30304 524 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 ATP12AP54707 1039 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 MRNIPQ6NTE8 343 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 TRPM5Q9NZQ8 1165 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 WARSP23381 471 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 ETFBP38117 255 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 NEDD4P46934 1319 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 NFIL3Q16649 462 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 SAE1Q9UBE0 346 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 RAD54BQ9Y620 910 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 RARBP10826 455 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 GARTP22102 1010 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 SWSAP1Q6NVH7 229 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 HHIPL2Q6UWX4 724 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 TMC5Q6UXY8 1006 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 OTOAQ7RTW8 1153 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 ISCA1Q9BUE6 129 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 TRIM49BA6NDI0 452 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 DNALI1O14645 258 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 STX11O75558 287 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 FMO5P49326 533 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 SNRNP35Q16560 246 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 SLC35G2Q8TBE7 412 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 S100A13Q99584 98 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 CYP39A1Q9NYL5 469 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 PPP1R37O75864 691 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 CNPP09543 421 aaKnown RBP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 FBXO42Q6P3S6 717 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 SPATA4Q8NEY3 305 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 MDM1Q8TC05 714 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 KCTD14Q9BQ13 255 aaPredicted RBP13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 TEX13BQ9BXU2 312 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 VPS51Q9UID3 782 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 DSEQ9UL01 958 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 DYRK1BQ9Y463 629 aa13.63□□□□□ -0.23
SYNGAP1-208ENST00000629380 CNTFP26441 200 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 ITGA9Q13797 1035 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 AHSPQ9NZD4 102 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 RPN2P04844 631 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 FAM200BP0CF97 657 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 MZF1P28698 734 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 KIAA0408Q6ZU52 694 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 ADGRF4Q8IZF3 695 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 ELP3Q9H9T3 547 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 SDK1Q7Z5N4 2213 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 TBKBP1A7MCY6 615 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 CACNB2Q08289 660 aaPredicted RBP13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 C10orf120Q5SQS8 335 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 HIC2Q96JB3 615 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 SNX12Q9UMY4 172 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 CPT1AP50416 773 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 EFHC1Q5JVL4 640 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 ANKRD13AQ8IZ07 590 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 PUS7LQ9H0K6 701 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 WDR41Q9HAD4 459 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 COMMD8Q9NX08 183 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 KLHL28Q9NXS3 571 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 NRXN1Q9ULB1 1477 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 ZNF862O60290 1169 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 ITIH4Q14624 930 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 CHI3L2Q15782 390 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 SMAD1Q15797 465 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms