RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 IZUMO1Q8IYV9 350 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 SLC35G2Q8TBE7 412 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 OTUD5Q96G74 571 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF304Q9HCX3 659 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 FAM153AQ9UHL3 310 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 AP3M1Q9Y2T2 418 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 TMEM120BA0PK00 339 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ODC1P11926 461 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ATP6V1B2P21281 511 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 KLHL17Q6TDP4 642 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 GAS2L3Q86XJ1 694 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 STX12Q86Y82 276 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 SH3RF3Q8TEJ3 882 aaPredicted RBP9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ZCWPW1Q9H0M4 648 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ELOVL6Q9H5J4 265 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 F5H6K3 240 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 TAF4O00268 1085 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 TBX3O15119 743 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 TPST1O60507 370 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ZNF682O95780 498 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 TGM2P21980 687 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 SOX11P35716 441 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 KLRC3Q07444 240 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 PUDPQ08623 228 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 PLEKHA7Q6IQ23 1121 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 CAMK1DQ8IU85 385 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 SLC22A9Q8IVM8 553 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ZCCHC7Q8N3Z6 543 aaKnown RBP9.23□□□□□ -0.93
GABRB3-216ENST00000628124 SNRNP27Q8WVK2 155 aaKnown RBP9.23□□□□□ -0.93
GABRB3-216ENST00000628124 CLCC1Q96S66 551 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 TMEM117Q9H0C3 514 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 TRPC4Q9UBN4 977 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 ITGB1BP2Q9UKP3 347 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 SIK3Q9Y2K2 1263 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 PCDHB7Q9Y5E2 793 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 PLXNC1O60486 1568 aa9.23□□□□□ -0.93
GABRB3-216ENST00000628124 PTCH1Q13635 1447 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 KCNQ3O43525 872 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 TKTP29401 623 aaKnown RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 RAB2AP61019 212 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 RALGDSQ12967 914 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 DGKDQ16760 1214 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 FUT11Q495W5 492 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 FAM98BQ52LJ0 330 aaKnown RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ULK2Q8IYT8 1036 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 REPS1Q96D71 796 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 CHAMP1Q96JM3 812 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 TPRKBQ9Y3C4 175 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 C19orf81C9J6K1 198 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ZBTB39O15060 712 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 FKBP6O75344 327 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 RPN2P04844 631 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 HSMCR30P0CW71 290 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 VAV1P15498 845 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 CBFBQ13951 182 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 SPANXN2Q5MJ10 180 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 MZT2AQ6P582 158 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 TMEM26Q6ZUK4 368 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 MCOLN3Q8TDD5 553 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 LPAR1Q92633 364 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 RERGLQ9H628 205 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ZFYVE28Q9HCC9 887 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 PIH1D3Q9NQM4 214 aaKnown RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 SNX13Q9Y5W8 968 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ITSN2Q9NZM3 1697 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 A0A087X0T9 212 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 UBE2QL1A1L167 161 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 EXTL3O43909 919 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 GUCY1B2O75343 617 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ENO2P09104 434 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 TAF6P49848 677 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 KPNA1P52294 538 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 NFIAQ12857 509 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ALG11Q2TAA5 492 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 PGS1Q32NB8 556 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 BRINP3Q76B58 766 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ARID3BQ8IVW6 561 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 B3GALNT2Q8NCR0 500 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 TMEM169Q96HH4 297 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 MAGEB10Q96LZ2 347 aaPredicted RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 SLC9A7Q96T83 725 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 NIF3L1Q9GZT8 377 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 CHST12Q9NRB3 414 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 CRYL1Q9Y2S2 319 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 TTLL13PA6NNM8 815 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 IGF2BP3O00425 579 aaKnown RBP eCLIP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 MYL12BO14950 172 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 FAM20BO75063 409 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 CPSF4O95639 269 aaKnown RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 CCDC166P0CW27 439 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ACADMP11310 421 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 NCAM1P13591 858 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 OR1G1P47890 313 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 ALDH7A1P49419 539 aaKnown RBP9.22□□□□□ -0.93
GABRB3-216ENST00000628124 GRIK3Q13003 919 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 SCAIQ8N9R8 606 aa9.22□□□□□ -0.93
GABRB3-216ENST00000628124 DNAJC1Q96KC8 554 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms