RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 JAM2P57087 298 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 SDHAF4Q5VUM1 108 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 TMC8Q8IU68 726 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 GPR152Q8TDT2 470 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 ING5Q8WYH8 240 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 TFAP2BQ92481 460 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 TCEAL4Q96EI5 215 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 C8orf48Q96LL4 319 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 ZNF512Q96ME7 567 aaPredicted RBP15.56■□□□□ 0.08
PNKP-221ENST00000627317 RPP25Q9BUL9 199 aaKnown RBP15.56■□□□□ 0.08
PNKP-221ENST00000627317 GDE1Q9NZC3 331 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 TSPAN16Q9UKR8 245 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 MRPS23Q9Y3D9 190 aaKnown RBP15.56■□□□□ 0.08
PNKP-221ENST00000627317 ITIH6Q6UXX5 1313 aa15.56■□□□□ 0.08
PNKP-221ENST00000627317 MYH10P35580 1976 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 M0QYV0 167 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 CSH1P0DML2 217 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 CSH2P0DML3 217 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 SRFP11831 508 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 FCARP24071 287 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 MAP3K7CLP57077 242 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 FIGNQ5HY92 759 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 CWF19L1Q69YN2 538 aaKnown RBP15.55■□□□□ 0.08
PNKP-221ENST00000627317 SPECC1LQ69YQ0 1117 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 LCLAT1Q6UWP7 414 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 GPIHBP1Q8IV16 184 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 FMNL3Q8IVF7 1028 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 HS6ST3Q8IZP7 471 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 ST13P5Q8NFI4 369 aaPredicted RBP15.55■□□□□ 0.08
PNKP-221ENST00000627317 PSMG2Q969U7 264 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 SPATA17Q96L03 361 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 CEP295NLQ96MC4 621 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 SMOQ99835 787 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 CORO1BQ9BR76 489 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 DUSP16Q9BY84 665 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 EDEM3Q9BZQ6 932 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 KCNH6Q9H252 994 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 ACP6Q9NPH0 428 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 ASAH2Q9NR71 780 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 SLC2A4RGQ9NR83 387 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 TMEM30AQ9NV96 361 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 MYO6Q9UM54 1294 aa15.55■□□□□ 0.08
PNKP-221ENST00000627317 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.55■□□□□ 0.08
PNKP-221ENST00000627317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■■□□□ 13.1
PNKP-221ENST00000627317 SLC38A8A6NNN8 435 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 AP5Z1O43299 807 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 TPM1P09493 284 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 SETSIPP0DME0 302 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 CLCN1P35523 988 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 ZNF75DP51815 510 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 ARID5AQ03989 594 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 BST2Q10589 180 aaKnown RBP15.54■□□□□ 0.08
PNKP-221ENST00000627317 TRIM14Q14142 442 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 CNGA2Q16280 664 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 IER5LQ5T953 404 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 CLEC20AQ6ZU45 233 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 SLC47A2Q86VL8 602 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 TTC30AQ86WT1 665 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 VSTM4Q8IW00 320 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 ANKRD52Q8NB46 1076 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 LEMD2Q8NC56 503 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 STKLD1Q8NE28 680 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 ZNF397Q8NF99 534 aaPredicted RBP15.54■□□□□ 0.08
PNKP-221ENST00000627317 BAP1Q92560 729 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 KCNK16Q96T55 309 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 ZSWIM1Q9BR11 485 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 TTYH3Q9C0H2 523 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 CSNK1G1Q9HCP0 422 aa15.54■□□□□ 0.08
PNKP-221ENST00000627317 MAGED2Q9UNF1 606 aaPredicted RBP15.54■□□□□ 0.08
PNKP-221ENST00000627317 A0A1W2PQJ5 194 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 KRBA1A5PL33 1030 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 LRRC53A6NM62 1247 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 BEST1O76090 585 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 CCDC172P0C7W6 258 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 CYP11B1P15538 503 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 FERP16591 822 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 KRT9P35527 623 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 PLA2G5P39877 138 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 ASIC2Q16515 512 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 CYP4A22Q5TCH4 519 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 DENND5BQ6ZUT9 1274 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 MTSS1LQ765P7 747 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 PDZD4Q76G19 769 aaPredicted RBP15.53■□□□□ 0.08
PNKP-221ENST00000627317 DNAJB7Q7Z6W7 309 aaPredicted RBP15.53■□□□□ 0.08
PNKP-221ENST00000627317 SUGP1Q8IWZ8 645 aaKnown RBP15.53■□□□□ 0.08
PNKP-221ENST00000627317 SHKBP1Q8TBC3 707 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 UBA3Q8TBC4 463 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 EPS8L1Q8TE68 723 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 CPLX3Q8WVH0 158 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 ZNF606Q8WXB4 792 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 GCNAQ96QF7 691 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 PDCL3Q9H2J4 239 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 EHD2Q9NZN4 543 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 WNT16Q9UBV4 365 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 CEP83Q9Y592 693 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 MYO10Q9HD67 2058 aa15.53■□□□□ 0.08
PNKP-221ENST00000627317 NCANO14594 1321 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 XPO1O14980 1071 aaKnown RBP15.52■□□□□ 0.08
PNKP-221ENST00000627317 ECI2O75521 394 aa15.52■□□□□ 0.08
PNKP-221ENST00000627317 RTN3O95197 1032 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms