RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PDGFRLQ15198 375 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 ANGPT1Q15389 498 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 ITPRIPL2Q3MIP1 535 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 CCDC40Q4G0X9 1142 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 MAMSTRQ6ZN01 415 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 C1orf210Q8IVY1 113 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 ZNF687Q8N1G0 1237 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 SLC2A14Q8TDB8 520 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 KCNK16Q96T55 309 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 SMG9Q9H0W8 520 aaKnown RBP23.69■■□□□ 1.38
SF1-220ENST00000626028 TRPC7Q9HCX4 862 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 CCL26Q9Y258 94 aa23.69■■□□□ 1.38
SF1-220ENST00000626028 H0Y858 1186 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 FAM200BP0CF97 657 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 TBXAS1P24557 533 aaPredicted RBP23.68■■□□□ 1.38
SF1-220ENST00000626028 FMO5P49326 533 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 KPNA1P52294 538 aaPredicted RBP23.68■■□□□ 1.38
SF1-220ENST00000626028 YWHAEP62258 255 aaKnown RBP23.68■■□□□ 1.38
SF1-220ENST00000626028 SLC7A9P82251 487 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 AMPD2Q01433 879 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 TAF10Q12962 218 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 USP4Q13107 963 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 WHAMMQ8TF30 809 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 ATOH1Q92858 354 aaPredicted RBP23.68■■□□□ 1.38
SF1-220ENST00000626028 CYFIP2Q96F07 1278 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 GKN1Q9NS71 199 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 CISHQ9NSE2 258 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 CTNND2Q9UQB3 1225 aa23.68■■□□□ 1.38
SF1-220ENST00000626028 MTF2Q9Y483 593 aaPredicted RBP23.68■■□□□ 1.38
SF1-220ENST00000626028 C2orf78A6NCI8 922 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 PROB1E7EW31 1015 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 OAS1P00973 400 aaKnown RBP23.67■■□□□ 1.38
SF1-220ENST00000626028 CCDC130P13994 396 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 CD58P19256 250 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 CD72P21854 359 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 CTHP32929 405 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 SLC5A3P53794 718 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 FZD5Q13467 585 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 ZNF77Q15935 545 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 GPIHBP1Q8IV16 184 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 ARL14EPQ8N8R7 260 aaPredicted RBP23.67■■□□□ 1.38
SF1-220ENST00000626028 C12orf29Q8N999 325 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 MLKLQ8NB16 471 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 FBXO32Q969P5 355 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 TWNKQ96RR1 684 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 SLC22A12Q96S37 553 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 CYP2S1Q96SQ9 504 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 SMOQ99835 787 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 FAM49BQ9NUQ9 324 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 RWDD2AQ9UIY3 292 aa23.67■■□□□ 1.38
SF1-220ENST00000626028 VPS13AQ96RL7 3174 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 SPECC1L-ADORA2AF8WAN1 911 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 RUNX3Q13761 415 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 MTF1Q14872 753 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 CAMK4Q16566 473 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 DDX42Q86XP3 938 aaKnown RBP eCLIP23.66■■□□□ 1.38
SF1-220ENST00000626028 ZMIZ2Q8NF64 920 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 EXOC4Q96A65 974 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 TMEM176AQ96HP8 235 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 ZFYVE19Q96K21 471 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.66■■□□□ 1.383e-6■■■■■ 513.6
SF1-220ENST00000626028 GTSE1Q9NYZ3 720 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 FBXO4Q9UKT5 387 aa23.66■■□□□ 1.38
SF1-220ENST00000626028 LRRN2O75325 713 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 CCDC192P0DO97 292 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 NBL1P41271 181 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 CUL2Q13617 745 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 LRRC32Q14392 662 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 ZNF528Q3MIS6 628 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 TRIM59Q8IWR1 403 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 OSCP1Q8WVF1 389 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 ATP2A3Q93084 1043 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 CLSTN2Q9H4D0 955 aa23.65■■□□□ 1.38
SF1-220ENST00000626028 ZDHHC11BP0C7U3 371 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 MAP3K7CLP57077 242 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 ORC1Q13415 861 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 DGKKQ5KSL6 1271 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 ARHGAP17Q68EM7 881 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 CLEC20AQ6ZU45 233 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 SYNPOQ8N3V7 929 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 SH3RF2Q8TEC5 729 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 TATDN2Q93075 761 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 HEXIM2Q96MH2 286 aaKnown RBP23.64■■□□□ 1.37
SF1-220ENST00000626028 DUSP16Q9BY84 665 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 UBXN6Q9BZV1 441 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 CHRDQ9H2X0 955 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 SEMA4AQ9H3S1 761 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 KIAA1257Q9ULG3 409 aa23.64■■□□□ 1.37
SF1-220ENST00000626028 BEST1O76090 585 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 RAD23BP54727 409 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 HECTD3Q5T447 861 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 CPA6Q8N4T0 437 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 SLC4A11Q8NBS3 891 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 SCAMP5Q8TAC9 235 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 GBP4Q96PP9 640 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 ARID3AQ99856 593 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 SRRTQ9BXP5 876 aaKnown RBP23.63■■□□□ 1.37
SF1-220ENST00000626028 HPS4Q9NQG7 708 aa23.63■■□□□ 1.37
SF1-220ENST00000626028 TLR8Q9NR97 1041 aaKnown RBP23.63■■□□□ 1.37
SF1-220ENST00000626028 SPATA6Q9NWH7 488 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms