RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 H0YGN5 161 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 AGRPO00253 132 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 TRDMT1O14717 391 aaKnown RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 BAIAP3O94812 1187 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 PPP3CAQ08209 521 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 IL17AQ16552 155 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DNAJC21Q5F1R6 531 aaKnown RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 NUGGCQ68CJ6 796 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DENND1CQ8IV53 801 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 CCDC33Q8N5R6 958 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 C12orf76Q8N812 135 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 C12orf29Q8N999 325 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 RXFP2Q8WXD0 754 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 OMDQ99983 421 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DNAJC17Q9NVM6 304 aaKnown RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 BFARQ9NZS9 450 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ARHGAP28Q9P2N2 729 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DEC1Q9P2X7 70 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 VANGL2Q9ULK5 521 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DAAM1Q9Y4D1 1078 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 SGCGQ13326 291 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ZBTB41Q5SVQ8 909 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 SLC47A2Q86VL8 602 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DEFB106AQ8N104 65 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 FEZF2Q8TBJ5 459 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 CCHCR1Q8TD31 782 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 GDPD5Q8WTR4 605 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 SLC35C1Q96A29 364 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 ZNF333Q96JL9 665 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 HOMER3Q9NSC5 361 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DDX56Q9NY93 547 aaKnown RBP9.48□□□□□ -0.89
HDAC9-229ENST00000622668 NKIRAS1Q9NYS0 192 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 CFAP97Q9P2B7 532 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 SLC30A1Q9Y6M5 507 aa9.48□□□□□ -0.89
HDAC9-229ENST00000622668 DHX15O43143 795 aaKnown RBP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 GJA1P17302 382 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 EDNRBP24530 442 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 SLC11A1P49279 550 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 NCKAP1LP55160 1127 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 CDR2Q01850 454 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 CBX2Q14781 532 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 KCNT1Q5JUK3 1230 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 SYCP2LQ5T4T6 812 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 SLFN11Q7Z7L1 901 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 DSG4Q86SJ6 1040 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 BBOF1Q8ND07 529 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 CHMP6Q96FZ7 201 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 VPS39Q96JC1 886 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 ADAMTS5Q9UNA0 930 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 E5RI56 91 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 SYN3O14994 580 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 GGCXP38435 758 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 LILRA4P59901 499 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 IQCB1Q15051 598 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 POM121L1PQ3SYA9 428 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 BOLA3Q53S33 107 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 ARSHQ5FYA8 562 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 CDKL3Q8IVW4 592 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 DEFB123Q8N688 67 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 SAMD11Q96NU1 681 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 PANX2Q96RD6 677 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 BRWD3Q6RI45 1802 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 NRAPQ86VF7 1730 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 C3orf70A6NLC5 250 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 POC1B-GALNT4F8VUJ3 575 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 OPLAHO14841 1288 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 PMPCBO75439 489 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 SOAT2O75908 522 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 MICAL2O94851 1124 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 PMS1P54277 932 aaKnown RBP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 FAM124AQ86V42 546 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 DDX42Q86XP3 938 aaKnown RBP eCLIP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 TRIM48Q8IWZ4 208 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 SLC25A41Q8N5S1 370 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 TDRD5Q8NAT2 981 aaKnown RBP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 EXT2Q93063 718 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 AASDHPPTQ9NRN7 309 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 RSPH14Q9UHP6 348 aa9.47□□□□□ -0.89
HDAC9-229ENST00000622668 PACSIN2Q9UNF0 486 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-229ENST00000622668 CCDC195A0A1B0GUA6 201 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 A0A1W2PRU2 124 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 GOLGA8MH3BSY2 632 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 PAMP19021 973 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 SCNN1BP51168 640 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 PLTPP55058 493 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 EIF3EP60228 445 aaKnown RBP9.46□□□□□ -0.89
HDAC9-229ENST00000622668 ROR1Q01973 937 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 MCL1Q07820 350 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 LEKR1Q6ZMV7 388 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 SH3RF1Q7Z6J0 888 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 PCGF5Q86SE9 256 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 FAM35AQ86V20 835 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 TRIM59Q8IWR1 403 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 IPMKQ8NFU5 416 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 PIK3R5Q8WYR1 880 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 TNFRSF25Q93038 417 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 TOX2Q96NM4 488 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 ZNF518BQ9C0D4 1074 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 MAN1C1Q9NR34 630 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms