RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 TPSD1Q9BZJ3 242 aa9.93□□□□□ -0.82
TARDBP-227ENST00000622057 ZNF518BQ9C0D4 1074 aa9.93□□□□□ -0.82
TARDBP-227ENST00000622057 VPS45Q9NRW7 570 aa9.93□□□□□ -0.82
TARDBP-227ENST00000622057 CHORDC1Q9UHD1 332 aaPredicted RBP9.93□□□□□ -0.82
TARDBP-227ENST00000622057 PCDHGA5Q9Y5G8 931 aa9.93□□□□□ -0.82
TARDBP-227ENST00000622057 KIF26AQ9ULI4 1882 aaPredicted RBP9.93□□□□□ -0.82
TARDBP-227ENST00000622057 CACNA1AO00555 2505 aa9.93□□□□□ -0.82
TARDBP-227ENST00000622057 YEATS4O95619 227 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 CAVIN2O95810 425 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 TIE1P35590 1138 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 CASP4P49662 377 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 LIMK1P53667 647 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 CACNA2D1P54289 1103 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 CDH8P55286 799 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 SNRPFP62306 86 aaKnown RBP9.92□□□□□ -0.82
TARDBP-227ENST00000622057 NOP14P78316 857 aaKnown RBP9.92□□□□□ -0.82
TARDBP-227ENST00000622057 SLC7A9P82251 487 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 BIRC3Q13489 604 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 DHCR24Q15392 516 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 USP39Q53GS9 565 aaKnown RBP9.92□□□□□ -0.82
TARDBP-227ENST00000622057 N4BP2L1Q5TBK1 243 aaPredicted RBP9.92□□□□□ -0.82
TARDBP-227ENST00000622057 RNF43Q68DV7 783 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 ANO7Q6IWH7 933 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 NUP93Q8N1F7 819 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 USP33Q8TEY7 942 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 SYAP1Q96A49 352 aaPredicted RBP9.92□□□□□ -0.82
TARDBP-227ENST00000622057 ELMO3Q96BJ8 720 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 KCNK16Q96T55 309 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 MED10Q9BTT4 135 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 B3GNT5Q9BYG0 378 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 FAM13BQ9NYF5 915 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 CFAP97Q9P2B7 532 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 EBF1Q9UH73 591 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
TARDBP-227ENST00000622057 ATG2BQ96BY7 2078 aa9.92□□□□□ -0.82
TARDBP-227ENST00000622057 SLC9A3R1O14745 358 aaPredicted RBP9.91□□□□□ -0.82
TARDBP-227ENST00000622057 TM4SF5O14894 197 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 CYP17A1P05093 508 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 YWHAQP27348 245 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 ATICP31939 592 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 ME1P48163 572 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 CUL4BQ13620 913 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 KNOP1Q1ED39 458 aaKnown RBP9.91□□□□□ -0.82
TARDBP-227ENST00000622057 GAB4Q2WGN9 574 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 EMC10Q5UCC4 262 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 CNNM4Q6P4Q7 775 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 RHBDF2Q6PJF5 856 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 B3GALNT2Q8NCR0 500 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 FBXO32Q969P5 355 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 PNKPQ96T60 521 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 BACH2Q9BYV9 841 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 ELOVL4Q9GZR5 314 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 TMEM30AQ9NV96 361 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 PCDHA7Q9UN72 937 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 SDK1Q7Z5N4 2213 aa9.91□□□□□ -0.82
TARDBP-227ENST00000622057 ZNF638Q14966 1978 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 UBE4BO95155 1302 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 PVALEFA0A1B0GWK0 134 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 BCLAF3A2AJT9 711 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 LRRIQ3A6PVS8 624 aaPredicted RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 C4orf47A7E2U8 309 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 ALDH1A2O94788 518 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 RTN3O95197 1032 aaPredicted RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 STAU1O95793 577 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 OLFM2O95897 454 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 OAS1P00973 400 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 APODP05090 189 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 DHPSP49366 369 aaPredicted RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 MRPS21P82921 87 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 EHHADHQ08426 723 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 CRY1Q16526 586 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 ST3GAL2Q16842 350 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 ZNF699Q32M78 642 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 ZNF667Q5HYK9 610 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 SCARA5Q6ZMJ2 495 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 C12orf40Q86WS4 652 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 SFTPA1Q8IWL2 248 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 GRAMD1CQ8IYS0 662 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 CEP57L1Q8IYX8 460 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 PGBD3Q8N328 593 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 ALLCQ8N6M5 410 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 NAT16Q8N8M0 369 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 TXNDC5Q8NBS9 432 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 PDZD8Q8NEN9 1154 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 MDGA1Q8NFP4 955 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 SCAMP5Q8TAC9 235 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 PLEKHO2Q8TD55 490 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 RLN3Q8WXF3 142 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 EDEM2Q9BV94 578 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 LSM14BQ9BX40 385 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 GZF1Q9H116 711 aaPredicted RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 SMYD3Q9H7B4 428 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 MAGEF1Q9HAY2 307 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 ZDHHC4Q9NPG8 344 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 ARHGEF4Q9NR80 690 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 CGNQ9P2M7 1197 aaKnown RBP9.9□□□□□ -0.82
TARDBP-227ENST00000622057 SERTAD1Q9UHV2 236 aa9.9□□□□□ -0.82
TARDBP-227ENST00000622057 MMP17Q9ULZ9 603 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms