RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 A0A1W2PQD8 194 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 LEFTY2O00292 366 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 RNF40O75150 1001 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 RTN3O95197 1032 aaPredicted RBP25.51■■□□□ 1.67
ATXN3-253ENST00000621269 YWHAQP27348 245 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 SLC7A9P82251 487 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 SRSF5Q13243 272 aaKnown RBP25.51■■□□□ 1.67
ATXN3-253ENST00000621269 PKN3Q6P5Z2 889 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 KRBA2Q6ZNG9 492 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 CEP68Q76N32 757 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 WDR5BQ86VZ2 330 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 PDZD8Q8NEN9 1154 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 KCNK16Q96T55 309 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 RNF38Q9H0F5 515 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 TMEM30AQ9NV96 361 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 RETP07949 1114 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 SDHBP21912 280 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 LMNB2Q03252 620 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 DPYDQ12882 1025 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 RSPO4Q2I0M5 234 aaPredicted RBP25.5■■□□□ 1.67
ATXN3-253ENST00000621269 SV2AQ7L0J3 742 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 DGLUCYQ7Z3D6 616 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.5■■□□□ 1.67
ATXN3-253ENST00000621269 FAM35AQ86V20 835 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 FBXO32Q969P5 355 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 SDCBP2Q9H190 292 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 MAPK8IP1Q9UQF2 711 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 CPQQ9Y646 472 aa25.5■■□□□ 1.67
ATXN3-253ENST00000621269 MAPK13O15264 365 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 NR2F2P24468 414 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 PIK3CAP42336 1068 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 VAMP7P51809 220 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 ZXDBP98169 803 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 NAIF1Q69YI7 327 aaPredicted RBP25.49■■□□□ 1.67
ATXN3-253ENST00000621269 ACOT1Q86TX2 421 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 OVCA2Q8WZ82 227 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 SMARCD1Q96GM5 515 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 CCDC34Q96HJ3 373 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 DMAP1Q9NPF5 467 aaPredicted RBP25.49■■□□□ 1.67
ATXN3-253ENST00000621269 SMPD4Q9NXE4 827 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 EP300Q09472 2414 aaPredicted RBP25.49■■□□□ 1.67
ATXN3-253ENST00000621269 GREB1Q4ZG55 1949 aa25.49■■□□□ 1.67
ATXN3-253ENST00000621269 DMXL1Q9Y485 3027 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 PTPRDP23468 1912 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 PRR5-ARHGAP8B1AHC4 643 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 OLFM2O95897 454 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 OAS1P00973 400 aaKnown RBP25.48■■□□□ 1.67
ATXN3-253ENST00000621269 KRT13P13646 458 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 TRIM21P19474 475 aaKnown RBP25.48■■□□□ 1.67
ATXN3-253ENST00000621269 RPL13P26373 211 aaKnown RBP25.48■■□□□ 1.67
ATXN3-253ENST00000621269 ARHGAP8P85298 464 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 SPEM2Q0P670 501 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 NFIL3Q16649 462 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 DDX42Q86XP3 938 aaKnown RBP eCLIP25.48■■□□□ 1.67
ATXN3-253ENST00000621269 KIAA1958Q8N8K9 716 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 CCDC26Q8TAB7 109 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 IMPG2Q9BZV3 1241 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 DLL3Q9NYJ7 618 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 SPTBN4Q9H254 2564 aa25.48■■□□□ 1.67
ATXN3-253ENST00000621269 OTOGLQ3ZCN5 2332 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 SLC9A3R1O14745 358 aaPredicted RBP25.47■■□□□ 1.67
ATXN3-253ENST00000621269 AP1G2O75843 785 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 ZNF202O95125 648 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 ASS1P00966 412 aaKnown RBP25.47■■□□□ 1.67
ATXN3-253ENST00000621269 HLA-DRAP01903 254 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 MBL2P11226 248 aaPredicted RBP25.47■■□□□ 1.67
ATXN3-253ENST00000621269 HOXC13P31276 330 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 PXNP49023 591 aaPredicted RBP25.47■■□□□ 1.67
ATXN3-253ENST00000621269 NDST1P52848 882 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 PAQR9Q6ZVX9 377 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 INTS8Q75QN2 995 aaKnown RBP25.47■■□□□ 1.67
ATXN3-253ENST00000621269 FILIP1Q7Z7B0 1213 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 UNC93AQ86WB7 457 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 CAMKK1Q8N5S9 505 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 RPLP0P6Q8NHW5 317 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 GOLPH3LQ9H4A5 285 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 KRT82Q9NSB4 513 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 COMMD8Q9NX08 183 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 ANAPC1Q9H1A4 1944 aa25.47■■□□□ 1.67
ATXN3-253ENST00000621269 CCDC163A0A0D9SF12 145 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 LRP3O75074 770 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 TGM1P22735 817 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 PSMC2P35998 433 aaKnown RBP25.46■■□□□ 1.67
ATXN3-253ENST00000621269 SLC5A3P53794 718 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 ORC1Q13415 861 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 C1orf220Q5T0J3 134 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 SPOPLQ6IQ16 392 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 FUKQ8N0W3 1084 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 CRYBG2Q8N1P7 616 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 GUF1Q8N442 669 aaKnown RBP25.46■■□□□ 1.67
ATXN3-253ENST00000621269 SCAMP5Q8TAC9 235 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 PARD6AQ9NPB6 346 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 CFAP97Q9P2B7 532 aa25.46■■□□□ 1.67
ATXN3-253ENST00000621269 CHORDC1Q9UHD1 332 aaPredicted RBP25.46■■□□□ 1.67
ATXN3-253ENST00000621269 TNFRSF10BO14763 440 aa25.45■■□□□ 1.66
ATXN3-253ENST00000621269 AKAP3O75969 853 aa25.45■■□□□ 1.66
ATXN3-253ENST00000621269 CCDC130P13994 396 aa25.45■■□□□ 1.66
ATXN3-253ENST00000621269 ASPAP45381 313 aa25.45■■□□□ 1.66
ATXN3-253ENST00000621269 ADAM9Q13443 819 aa25.45■■□□□ 1.66
ATXN3-253ENST00000621269 HECTD3Q5T447 861 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms