RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 BRSK2Q8IWQ3 736 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 APPL2Q8NEU8 664 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 TATDN2Q93075 761 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 EXOC4Q96A65 974 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 SUSD3Q96L08 255 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 NAP1L3Q99457 506 aaPredicted RBP22.74■■□□□ 1.23
SGMS1-210ENST00000619438 SFXN1Q9H9B4 322 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 GTF3C4Q9UKN8 822 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 RAD51CO43502 376 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 OR1D2P34982 312 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 SND1Q7KZF4 910 aaKnown RBP eCLIP22.74■■□□□ 1.23
SGMS1-210ENST00000619438 ADHFE1Q8IWW8 467 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 GJD3Q8N144 294 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 RIPOR3Q96MK2 946 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 PLEKHA4Q9H4M7 779 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 EPB41L5Q9HCM4 733 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 CTTNBP2NLQ9P2B4 639 aa22.74■■□□□ 1.23
SGMS1-210ENST00000619438 SYF2O95926 243 aaKnown RBP22.73■■□□□ 1.23
SGMS1-210ENST00000619438 MMEP08473 750 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 BPIFB4P59827 614 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 GUCY2DQ02846 1103 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 WDR44Q5JSH3 913 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 VARS2Q5ST30 1063 aaKnown RBP22.73■■□□□ 1.23
SGMS1-210ENST00000619438 C9orf57Q5W0N0 161 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 MREGQ8N565 214 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 CGRRF1Q99675 332 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 CD320Q9NPF0 282 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 UVRAGQ9P2Y5 699 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 ALG6Q9Y672 507 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 CDY1Q9Y6F8 540 aa22.73■■□□□ 1.23
SGMS1-210ENST00000619438 H7C4K7 107 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 KRIT1O00522 736 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 C1RP00736 705 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 HLA-DRAP01903 254 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 WEE2P0C1S8 567 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 AP3M2P53677 418 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 RNASE9P60153 205 aaKnown RBP22.72■■□□□ 1.23
SGMS1-210ENST00000619438 ALS2CLQ60I27 953 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 KREMEN2Q8NCW0 462 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 SUSD6Q92537 303 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 PHF7Q9BWX1 381 aaPredicted RBP22.72■■□□□ 1.23
SGMS1-210ENST00000619438 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.72■■□□□ 1.23
SGMS1-210ENST00000619438 MTRRQ9UBK8 725 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 ADAM21Q9UKJ8 722 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 BACE2Q9Y5Z0 518 aa22.72■■□□□ 1.23
SGMS1-210ENST00000619438 CCDC195A0A1B0GUA6 201 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 TNNI1P19237 187 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 MTHFRP42898 656 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 CARSP49589 748 aaKnown RBP22.71■■□□□ 1.23
SGMS1-210ENST00000619438 ARPP19P56211 112 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 LILRA4P59901 499 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 MRPS25P82663 173 aaKnown RBP22.71■■□□□ 1.23
SGMS1-210ENST00000619438 CUL1Q13616 776 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 TAF3Q5VWG9 929 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 TDRD10Q5VZ19 366 aaKnown RBP22.71■■□□□ 1.23
SGMS1-210ENST00000619438 ACAD10Q6JQN1 1059 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 LILRA6Q6PI73 481 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 EFCAB13Q8IY85 973 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 WHAMMQ8TF30 809 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 NECTIN4Q96NY8 510 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 PCDHB8Q9UN66 801 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 TRIOO75962 3097 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 PIRO00625 290 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 PPEF2O14830 753 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 ADAM12O43184 909 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 SART1O43290 800 aaKnown RBP22.71■■□□□ 1.23
SGMS1-210ENST00000619438 PAX3P23760 479 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 ZP2Q05996 745 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 SURF1Q15526 300 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 CLEC16AQ2KHT3 1053 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 CTXN3Q4LDR2 81 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 DCAF12L1Q5VU92 463 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 KLHL7Q8IXQ5 586 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 CASKIN2Q8WXE0 1202 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 CDH22Q9UJ99 828 aa22.71■■□□□ 1.23
SGMS1-210ENST00000619438 TIMM13Q9Y5L4 95 aaPredicted RBP22.71■■□□□ 1.23
SGMS1-210ENST00000619438 GOLGA6BA6NDN3 693 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 AGPSO00116 658 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 VNN1O95497 513 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 TMEM191BP0C7N4 346 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 YWHAHQ04917 246 aaPredicted RBP22.7■■□□□ 1.22
SGMS1-210ENST00000619438 RAB33AQ14088 237 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 LIN9Q5TKA1 542 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 ZNF771Q7L3S4 317 aaPredicted RBP22.7■■□□□ 1.22
SGMS1-210ENST00000619438 MAATS1Q7Z4T9 603 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 UBL4BQ8N7F7 174 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 CCDC26Q8TAB7 109 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 VPS18Q9P253 973 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 CNTN6Q9UQ52 1028 aa22.7■■□□□ 1.22
SGMS1-210ENST00000619438 M0QZQ0 153 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 RFPL2O75678 378 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 PIK3CAP42336 1068 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 WNT7BP56706 349 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 ZNF280DQ6N043 979 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 RSPO2Q6UXX9 243 aaPredicted RBP22.69■■□□□ 1.22
SGMS1-210ENST00000619438 GPR149Q86SP6 731 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 SEC14L1Q92503 715 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 CD101Q93033 1021 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 ANKRD36BP1Q96IX9 119 aa22.69■■□□□ 1.22
SGMS1-210ENST00000619438 SENP8Q96LD8 212 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms