RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 FYTTD1Q96QD9 318 aaKnown RBP3.71□□□□□ -1.82
TARDBP-220ENST00000618606 PRR25Q96S07 402 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 TCF7L1Q9HCS4 588 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 KRT86O43790 486 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 ALDH2P05091 517 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 KCNA3P22001 575 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 MT3P25713 68 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 PSG6Q00889 435 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 SATB1Q01826 763 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 GHRHRQ02643 423 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 HYAL1Q12794 435 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 KRT81Q14533 505 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 TRIM71Q2Q1W2 868 aaKnown RBP3.7□□□□□ -1.82
TARDBP-220ENST00000618606 LEXMQ3ZCV2 418 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 C4orf46Q504U0 113 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 CCDC157Q569K6 752 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 PIP4P1Q86T03 277 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 CELF5Q8N6W0 485 aaKnown RBP3.7□□□□□ -1.82
TARDBP-220ENST00000618606 HPS3Q969F9 1004 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 CCDC17Q96LX7 622 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 SIGLEC11Q96RL6 698 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 EFHD1Q9BUP0 239 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 TRMT13Q9NUP7 481 aaKnown RBP3.7□□□□□ -1.82
TARDBP-220ENST00000618606 AMFRQ9UKV5 643 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 SNX14Q9Y5W7 946 aa3.7□□□□□ -1.82
TARDBP-220ENST00000618606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.7□□□□□ -1.82
TARDBP-220ENST00000618606 A0A087WWL8 130 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 A0A088AWK7 358 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 TMEM232C9JQI7 657 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 VNN1O95497 513 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 IL33O95760 270 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 MT-CO3P00414 261 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 ARFIP2P53365 341 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 SRSF1Q07955 248 aaKnown RBP eCLIP3.69□□□□□ -1.821e-7■□□□□ 10.9
TARDBP-220ENST00000618606 ZNF268Q14587 947 aaPredicted RBP3.69□□□□□ -1.82
TARDBP-220ENST00000618606 MGAT5BQ3V5L5 792 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 ATAT1Q5SQI0 421 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 DEF8Q6ZN54 512 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 Q6ZTC4 211 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 USP43Q70EL4 1123 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 SIRT6Q8N6T7 355 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 RBMXL3Q8N7X1 1067 aaKnown RBP3.69□□□□□ -1.82
TARDBP-220ENST00000618606 ACRBPQ8NEB7 543 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 PNISRQ8TF01 805 aaKnown RBP3.69□□□□□ -1.82
TARDBP-220ENST00000618606 C1GALT1C1Q96EU7 318 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 LYZL4Q96KX0 146 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 NUP88Q99567 741 aaPredicted RBP3.69□□□□□ -1.82
TARDBP-220ENST00000618606 CGRRF1Q99675 332 aa3.69□□□□□ -1.82
TARDBP-220ENST00000618606 GAR1Q9NY12 217 aaKnown RBP3.69□□□□□ -1.82
TARDBP-220ENST00000618606 CADPSQ9ULU8 1353 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 MYO1CO00159 1063 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 ADAM10O14672 748 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 TLR2O60603 784 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 PMPCBO75439 489 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 ABLIM3O94929 683 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 ALPLP05186 524 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 VCAM1P19320 739 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 SCP2P22307 547 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 GKP32189 559 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 NANOS2P60321 138 aaKnown RBP3.68□□□□□ -1.82
TARDBP-220ENST00000618606 ERV3-1Q14264 604 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 TMEM63BQ5T3F8 832 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 DPY19L3Q6ZPD9 716 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 LIX1LQ8IVB5 337 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 DNAJC5GQ8N7S2 189 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 MAP4K1Q92918 833 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 CUL5Q93034 780 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 PPP2R3CQ969Q6 453 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 CTHRC1Q96CG8 243 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 MTFMTQ96DP5 389 aaKnown RBP3.68□□□□□ -1.82
TARDBP-220ENST00000618606 MMS19Q96T76 1030 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 SMAD5Q99717 465 aaKnown RBP3.68□□□□□ -1.82
TARDBP-220ENST00000618606 C17orf80Q9BSJ5 609 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 PIH1D1Q9NWS0 290 aaKnown RBP3.68□□□□□ -1.82
TARDBP-220ENST00000618606 STXBP5LQ9Y2K9 1186 aa3.68□□□□□ -1.82
TARDBP-220ENST00000618606 LUC7L2Q9Y383 392 aaKnown RBP3.68□□□□□ -1.82
TARDBP-220ENST00000618606 CD8B2A6NJW9 211 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 PHKG2P15735 406 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 KRT17Q04695 432 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 FGL2Q14314 439 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 RAB11FIP4Q86YS3 637 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 SLC15A4Q8N697 577 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 LINC01465Q8N7H1 131 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 OSR1Q8TAX0 266 aaPredicted RBP3.67□□□□□ -1.82
TARDBP-220ENST00000618606 MAP3K14Q99558 947 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 P2RX7Q99572 595 aaKnown RBP3.67□□□□□ -1.82
TARDBP-220ENST00000618606 DPH1Q9BZG8 443 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 FOXP1Q9H334 677 aaPredicted RBP3.67□□□□□ -1.82
TARDBP-220ENST00000618606 ARMT1Q9H993 441 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 PI4KBQ9UBF8 816 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 CPA4Q9UI42 421 aa3.67□□□□□ -1.82
TARDBP-220ENST00000618606 ZMYM2Q9UBW7 1377 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 FAM90A8PA6NJQ4 464 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 M0R3H8 397 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 PSMD9O00233 223 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 CES2O00748 559 aa3.66□□□□□ -1.82
TARDBP-220ENST00000618606 CNOT3O75175 753 aaKnown RBP3.66□□□□□ -1.82
TARDBP-220ENST00000618606 GCATO75600 419 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms