RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PPP4CP60510 307 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 KCNJ8Q15842 424 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 DCDC5Q6ZRR9 648 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 SLFN11Q7Z7L1 901 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 ZFPM1Q8IX07 1006 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 SUN5Q8TC36 379 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 GRK7Q8WTQ7 553 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 ZFPM2Q8WW38 1151 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 ELMO3Q96BJ8 720 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 PPWD1Q96BP3 646 aaKnown RBP12.76□□□□□ -0.37
MATR3-227ENST00000618441 ZFYVE28Q9HCC9 887 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 ZNF229Q9UJW7 825 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 TIMM22Q9Y584 194 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 RGPD1P0DJD0 1748 aa12.76□□□□□ -0.37
MATR3-227ENST00000618441 MIF4GDA9UHW6 222 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 AIM2O14862 343 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 BUD23O43709 281 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 AKR1B1P15121 316 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 GSSP48637 474 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 GPS1Q13098 491 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 PRKG1Q13976 671 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 SNRNP48Q6IEG0 339 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 FAM196AQ6ZSG2 479 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 CATSPER3Q86XQ3 398 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 SNX29P2Q8IUI4 249 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 ERI1Q8IV48 349 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 NUDCD3Q8IVD9 361 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 ZNF786Q8N393 782 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 ACTRT2Q8TDY3 377 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 SKA1Q96BD8 255 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 GIMAP4Q9NUV9 329 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 DDX25Q9UHL0 483 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 SOX13Q9UN79 622 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 A0A1W2PPW3 197 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 IL33O95760 270 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 ETS1P14921 441 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 GYG1P46976 350 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 CTSWP56202 376 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 NME3Q13232 169 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 SPIDRQ14159 915 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 ERFEQ4G0M1 354 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 CCDC138Q96M89 665 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 BLOC1S4Q9NUP1 217 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 CFAP99D6REC4 459 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 TBCAO75347 108 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 GABBR2O75899 941 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 TDP2O95551 362 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 MAP4P27816 1152 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 EEF1DP29692 281 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 EIF3EP60228 445 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 TNFAIP8L3Q5GJ75 292 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 PSPC1Q8WXF1 523 aaKnown RBP12.75□□□□□ -0.37
MATR3-227ENST00000618441 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 HPS4Q9NQG7 708 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 ST14Q9Y5Y6 855 aa12.75□□□□□ -0.37
MATR3-227ENST00000618441 PVALEFA0A1B0GWK0 134 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 PI4K2BG5E9Z4 385 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 RPA1P27694 616 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 SOX5P35711 763 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 CYP4A11Q02928 519 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 CLIP4Q8N3C7 705 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 C7orf57Q8NEG2 295 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 ZSCAN18Q8TBC5 510 aaPredicted RBP12.74□□□□□ -0.37
MATR3-227ENST00000618441 SETDB2Q96T68 719 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 NEURL2Q9BR09 285 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 SPC25Q9HBM1 224 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 GPSM3Q9Y4H4 160 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 MAGEC1O60732 1142 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 MYBPC1Q00872 1141 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
MATR3-227ENST00000618441 CLUL1Q15846 466 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 TIGD2Q4W5G0 525 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 LINC00116Q8NCU8 138 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 TNIP2Q8NFZ5 429 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 ZNF564Q8TBZ8 553 aaPredicted RBP12.74□□□□□ -0.37
MATR3-227ENST00000618441 TGFBRAP1Q8WUH2 860 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 USP13Q92995 863 aaPredicted RBP12.74□□□□□ -0.37
MATR3-227ENST00000618441 BORCS5Q969J3 196 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 ATP6V1E2Q96A05 226 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 MAGEF1Q9HAY2 307 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 MKNK2Q9HBH9 465 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 WHRNQ9P202 907 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 KAT6AQ92794 2004 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 MGEA5O60502 916 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 SIN3BO75182 1162 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 EIF2AK2P19525 551 aaKnown RBP12.74□□□□□ -0.37
MATR3-227ENST00000618441 BTDP43251 543 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 TFDP1Q14186 410 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 SEC23AQ15436 765 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 CHI3L2Q15782 390 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 CRLF3Q8IUI8 442 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 PROM2Q8N271 834 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 RAD54LQ92698 747 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 AK8Q96MA6 479 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 TMEM79Q9BSE2 394 aa12.74□□□□□ -0.37
MATR3-227ENST00000618441 UBE2TQ9NPD8 197 aaPredicted RBP12.74□□□□□ -0.37
MATR3-227ENST00000618441 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms