RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NETO2Q8NC67 525 aa13□□□□□ -0.33
CIITA-212ENST00000618207 GDAP1Q8TB36 358 aa13□□□□□ -0.33
CIITA-212ENST00000618207 SPATA18Q8TC71 538 aa13□□□□□ -0.33
CIITA-212ENST00000618207 DYDC1Q8WWB3 177 aa13□□□□□ -0.33
CIITA-212ENST00000618207 VRTNQ9H8Y1 702 aa13□□□□□ -0.33
CIITA-212ENST00000618207 ASNSD1Q9NWL6 643 aa13□□□□□ -0.33
CIITA-212ENST00000618207 A6NNZ2 444 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 TNPO2O14787 897 aaKnown RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 PRPSAP2O60256 369 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 FAM107AO95990 144 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 PGK1P00558 417 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 RBP3P10745 1247 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 RARBP10826 455 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 FGFR1P11362 822 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 EIF3EP60228 445 aaKnown RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 LMNB2Q03252 620 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 PDIA2Q13087 525 aaKnown RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 KRT81Q14533 505 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 TMED2Q15363 201 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 TUBB8Q3ZCM7 444 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 EMC10Q5UCC4 262 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 ARRDC4Q8NCT1 418 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 XPO6Q96QU8 1125 aaKnown RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 TPX2Q9ULW0 747 aaKnown RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 TCRBV7S3A2A0A539 114 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 AGTP01019 485 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 AFF1P51825 1210 aaKnown RBP12.99□□□□□ -0.33
CIITA-212ENST00000618207 COPS2P61201 443 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 FKBP1BP68106 108 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 MORN1Q5T089 497 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 FAM172AQ8WUF8 416 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 ZSWIM8A7E2V4 1837 aa12.99□□□□□ -0.33
CIITA-212ENST00000618207 SMIM35A0A1B0GVV1 85 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 C2CD4BA6NLJ0 364 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 GABBR2O75899 941 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 VIMP08670 466 aaKnown RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 ZNF143P52747 638 aaPredicted RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 KYAT1Q16773 422 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 CA9Q16790 459 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 CCDC14Q49A88 953 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 FAXCQ5TGI0 409 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 CXCL17Q6UXB2 119 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 POLNQ7Z5Q5 900 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 RNF217Q8TC41 542 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 PAIP2Q9BPZ3 127 aaKnown RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 TMEM120BA0PK00 339 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 KPNA7A9QM74 516 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 F5H423 210 aaPredicted RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 H7C0C1 242 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 CLDN5O00501 218 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 HOXD8P13378 290 aaPredicted RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 GNL1P36915 607 aaPredicted RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 MMP13P45452 471 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 ATP5OP48047 213 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 CAV1Q03135 178 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 GNASQ5JWF2 1037 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 DARS2Q6PI48 645 aaKnown RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 RNF169Q8NCN4 708 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 BBOF1Q8ND07 529 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 SLC35B2Q8TB61 432 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 SLC2A14Q8TDB8 520 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 FNIP1Q8TF40 1166 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 NAALADL1Q9UQQ1 740 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 TIMM13Q9Y5L4 95 aaPredicted RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 EXOC1LA0A1B0GW35 172 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 SDC4P31431 198 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 RPL22P35268 128 aaKnown RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 GABRB2P47870 512 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 FSCN1Q16658 493 aaKnown RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 ZCCHC9Q8N567 271 aaKnown RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 LPPQ93052 612 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 FAM149B1Q96BN6 582 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 DDX20Q9UHI6 824 aaKnown RBP12.98□□□□□ -0.33
CIITA-212ENST00000618207 IPPQ9Y573 584 aa12.98□□□□□ -0.33
CIITA-212ENST00000618207 C17orf102A2RUQ5 167 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 MCF2LO15068 1137 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 SPAG7O75391 227 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 SSTR1P30872 391 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 ZBTB6Q15916 424 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 BBS9Q3SYG4 887 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 BBS12Q6ZW61 710 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 TAOK1Q7L7X3 1001 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 ZIC5Q96T25 663 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 SNX25Q9H3E2 840 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 CNOT10Q9H9A5 744 aaKnown RBP12.97□□□□□ -0.33
CIITA-212ENST00000618207 KIF9Q9HAQ2 790 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 UBQLN1Q9UMX0 589 aaKnown RBP12.97□□□□□ -0.33
CIITA-212ENST00000618207 MBLAC1A4D2B0 266 aaPredicted RBP12.97□□□□□ -0.33
CIITA-212ENST00000618207 HGSO14964 777 aaPredicted RBP12.97□□□□□ -0.33
CIITA-212ENST00000618207 KIAA0754O94854 1291 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 ITGAVP06756 1048 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 BRAFP15056 766 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 CPT1AP50416 773 aa12.97□□□□□ -0.33
CIITA-212ENST00000618207 ZKSCAN8Q15776 578 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms