RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 DRICH1Q6PGQ1 229 aaPredicted RBP18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 RHBDF2Q6PJF5 856 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 GLIS1Q8NBF1 620 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 RNF169Q8NCN4 708 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 CMASQ8NFW8 434 aaPredicted RBP18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 TNIP3Q96KP6 325 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 SEMA4AQ9H3S1 761 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 DDX20Q9UHI6 824 aaKnown RBP18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 GOLGA6L10A6NI86 522 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 CST8O60676 142 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 RPLP2P05387 115 aaKnown RBP18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 MYZAPP0CAP1 466 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 LCP1P13796 627 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 KLRC2P26717 231 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 CLCNKBP51801 687 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 LPIN1Q14693 890 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 MAP3K21Q5TCX8 1036 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 ATP6V1G3Q96LB4 118 aa18.18■□□□□ 0.5
PCDHGC3-205ENST00000617641 DPYSL4O14531 572 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 SHBGP04278 402 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 CHKAP35790 457 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 VCPP55072 806 aaKnown RBP18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 SNX16P57768 344 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 CCDC89Q8N998 374 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 SENP8Q96LD8 212 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 NGRNQ9NPE2 291 aaKnown RBP18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 AAASQ9NRG9 546 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 NOD1Q9Y239 953 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 EFR3BQ9Y2G0 817 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 GIT1Q9Y2X7 761 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 CLDN5O00501 218 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 ZSCAN5DPP0CG00 497 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 LMNB2Q03252 620 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 OASLQ15646 514 aaKnown RBP18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 MRPL10Q7Z7H8 261 aaKnown RBP18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 RFX6Q8HWS3 928 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 ALLCQ8N6M5 410 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 C3orf58Q8NDZ4 430 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 FAM172AQ8WUF8 416 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 CALN1Q9BXU9 219 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 DNAI2Q9GZS0 605 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 ANAPC5Q9UJX4 755 aa18.17■□□□□ 0.5
PCDHGC3-205ENST00000617641 CASTOR2A6NHX0 329 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 PRPSAP2O60256 369 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 TOMM70O94826 608 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 ETS1P14921 441 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 SDC4P31431 198 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 ACLYP53396 1101 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 OTUD4Q01804 1114 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 PLCB3Q01970 1234 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 IFFO1Q0D2I5 559 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 MMRN1Q13201 1228 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 PTK7Q13308 1070 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 SLMAPQ14BN4 828 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 IZUMO3Q5VZ72 239 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 DENND2CQ68D51 928 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 SCYL2Q6P3W7 929 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 BBS12Q6ZW61 710 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 RNF180Q86T96 592 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 ZDHHC17Q8IUH5 632 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 FUKQ8N0W3 1084 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 ACTL9Q8TC94 416 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 PAAF1Q9BRP4 392 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 DNAJC17Q9NVM6 304 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 GABRDO14764 452 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 RARGP13631 454 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 PTPN1P18031 435 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 TFE3P19532 575 aaPredicted RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 CDH6P55285 790 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 SLC29A2Q14542 456 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 DSC3Q14574 896 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 KIAA0319Q5VV43 1072 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 UHMK1Q8TAS1 419 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 SLC35B2Q8TB61 432 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 RAET1EQ8TD07 263 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 NKD2Q969F2 451 aaPredicted RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 PWWP2AQ96N64 755 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 TMEM121Q9BTD3 319 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 TRAIPQ9BWF2 469 aa18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 DRG1Q9Y295 367 aaKnown RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 TIMM13Q9Y5L4 95 aaPredicted RBP18.16■□□□□ 0.5
PCDHGC3-205ENST00000617641 HMGB1P1B2RPK0 211 aaPredicted RBP18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 NUDT17P0C025 328 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 CAPN2P17655 700 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 HOXD10P28358 340 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 RPL34P49207 117 aaKnown RBP18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 P3H1Q32P28 736 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 KRT71Q3SY84 523 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 HNRNPABQ99729 332 aaKnown RBP18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 ADAM2Q99965 735 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 C10orf88Q9H8K7 445 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 GPATCH2LQ9NWQ4 482 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 ERICH4A6NGS2 130 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 ARSEP51690 589 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 MDH1BQ5I0G3 518 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 PAQR9Q6ZVX9 377 aa18.15■□□□□ 0.5
PCDHGC3-205ENST00000617641 SLC26A9Q7LBE3 791 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms